RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 PTGER3P43115 390 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 AFF3P51826 1226 aaKnown RBP8.41□□□□□ -1.06
TRIM48-201ENST00000417545 PMS2P54278 862 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 CLDN2P57739 230 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 RACK1P63244 317 aaKnown RBP8.41□□□□□ -1.06
TRIM48-201ENST00000417545 DPTQ07507 201 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 INPP5AQ14642 412 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 FASTKD3Q14CZ7 662 aaKnown RBP8.41□□□□□ -1.06
TRIM48-201ENST00000417545 AGERQ15109 404 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 WSCD2Q2TBF2 565 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 GPR33Q49SQ1 333 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 LDLRAP1Q5SW96 308 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 HENMT1Q5T8I9 393 aaKnown RBP8.41□□□□□ -1.06
TRIM48-201ENST00000417545 PNCKQ6P2M8 343 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 KYAT3Q6YP21 454 aaKnown RBP8.41□□□□□ -1.06
TRIM48-201ENST00000417545 CCNI2Q6ZMN8 369 aaPredicted RBP8.41□□□□□ -1.06
TRIM48-201ENST00000417545 UNC5AQ6ZN44 842 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 RFLNAQ6ZTI6 216 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 TRMT10CQ7L0Y3 403 aaKnown RBP8.41□□□□□ -1.06
TRIM48-201ENST00000417545 CTAGE3PQ8IX95 158 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 LMNTD2Q8IXW0 634 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 MYRIPQ8NFW9 859 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 OR13J1Q8NGT2 312 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 GLYATL1Q969I3 302 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 CERS2Q96G23 380 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 HIC2Q96JB3 615 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 ZNF778Q96MU6 729 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 APOOQ9BUR5 198 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 KCNH6Q9H252 994 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 CCDC68Q9H2F9 335 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 CDC42EP4Q9H3Q1 356 aaKnown RBP8.41□□□□□ -1.06
TRIM48-201ENST00000417545 TM9SF3Q9HD45 589 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 IL26Q9NPH9 171 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 MBNL1Q9NR56 388 aaKnown RBP8.41□□□□□ -1.06
TRIM48-201ENST00000417545 IARS2Q9NSE4 1012 aaKnown RBP8.41□□□□□ -1.06
TRIM48-201ENST00000417545 NCDNQ9UBB6 729 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 NFKBIL1Q9UBC1 381 aaPredicted RBP8.41□□□□□ -1.06
TRIM48-201ENST00000417545 SMG5Q9UPR3 1016 aaKnown RBP8.41□□□□□ -1.06
TRIM48-201ENST00000417545 VPS9D1Q9Y2B5 631 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 CA5BQ9Y2D0 317 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 OR1A2Q9Y585 309 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 HS3ST3A1Q9Y663 406 aa8.41□□□□□ -1.06
TRIM48-201ENST00000417545 TP53BP1Q12888 1972 aaPredicted RBP8.4□□□□□ -1.06
TRIM48-201ENST00000417545 SPAG17Q6Q759 2223 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 A0A087WUV0 522 aaPredicted RBP8.4□□□□□ -1.06
TRIM48-201ENST00000417545 BHMG1C9JSJ3 638 aaPredicted RBP8.4□□□□□ -1.06
TRIM48-201ENST00000417545 GOLGA8KD6RF30 607 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 GOLGA8TH3BQL2 631 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 H7C0S8 307 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 RAD51BO15315 384 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 UGT1A9O60656 530 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 LILRB5O75023 590 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 MYCLP1P12525 358 aaPredicted RBP8.4□□□□□ -1.06
TRIM48-201ENST00000417545 UGT1A6P19224 532 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 UGT1A1P22309 533 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 UGT1A4P22310 534 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 SSTR1P30872 391 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 UGT1A3P35503 534 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 UGT1A5P35504 534 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 TTPAP49638 278 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 ARSDP51689 593 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 YPEL5P62699 121 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 MGAT5Q09328 741 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 MSLNQ13421 630 aaPredicted RBP8.4□□□□□ -1.06
TRIM48-201ENST00000417545 NFATC2Q13469 925 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 PDE1CQ14123 709 aaPredicted RBP8.4□□□□□ -1.06
TRIM48-201ENST00000417545 FGL2Q14314 439 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 UAP1Q16222 522 aaPredicted RBP8.4□□□□□ -1.06
TRIM48-201ENST00000417545 KYNUQ16719 465 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 ATP13A5Q4VNC0 1218 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 RNF187Q5TA31 235 aaPredicted RBP8.4□□□□□ -1.06
TRIM48-201ENST00000417545 ZNF470Q6ECI4 717 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 LAIR1Q6GTX8 287 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 NEPROQ6NW34 567 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 EMBQ6PCB8 327 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 ADAMTSL4Q6UY14 1074 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 CERS6Q6ZMG9 384 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 GCNT7Q6ZNI0 430 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 Q6ZSR6 202 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 C3orf62Q6ZUJ4 267 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 TMEM135Q86UB9 458 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 SERPINA9Q86WD7 417 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 DCP2Q8IU60 420 aaKnown RBP8.4□□□□□ -1.06
TRIM48-201ENST00000417545 SYT12Q8IV01 421 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 PLA2G15Q8NCC3 412 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 PRSS33Q8NF86 280 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 CEP76Q8TAP6 659 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 HEXDCQ8WVB3 486 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 NELL1Q92832 810 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 EID2BQ96D98 161 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 ZC3H10Q96K80 434 aaKnown RBP8.4□□□□□ -1.06
TRIM48-201ENST00000417545 WDR92Q96MX6 357 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 COPS8Q99627 209 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 CCDC77Q9BR77 488 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 TRIM56Q9BRZ2 755 aaKnown RBP8.4□□□□□ -1.06
TRIM48-201ENST00000417545 TSSK1BQ9BXA7 367 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 CLPBQ9H078 707 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 UGT1A7Q9HAW7 530 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 UGT1A10Q9HAW8 530 aa8.4□□□□□ -1.06
TRIM48-201ENST00000417545 UGT1A8Q9HAW9 530 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms