RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 RAVER1Q8IY67 606 aaKnown RBP14.7□□□□□ -0.06
RPS28-201ENST00000417088 CACNA2D3Q8IZS8 1091 aa14.7□□□□□ -0.06
RPS28-201ENST00000417088 IL22RA1Q8N6P7 574 aa14.7□□□□□ -0.06
RPS28-201ENST00000417088 LPCAT1Q8NF37 534 aa14.7□□□□□ -0.06
RPS28-201ENST00000417088 LRRN4Q8WUT4 740 aa14.7□□□□□ -0.06
RPS28-201ENST00000417088 COL26A1Q96A83 441 aa14.7□□□□□ -0.06
RPS28-201ENST00000417088 LYSMD1Q96S90 227 aa14.7□□□□□ -0.06
RPS28-201ENST00000417088 SLC38A3Q99624 504 aa14.7□□□□□ -0.06
RPS28-201ENST00000417088 GEMIN8Q9NWZ8 242 aaKnown RBP14.7□□□□□ -0.06
RPS28-201ENST00000417088 VPS18Q9P253 973 aa14.7□□□□□ -0.06
RPS28-201ENST00000417088 IL17BQ9UHF5 180 aa14.7□□□□□ -0.06
RPS28-201ENST00000417088 ZNHIT2Q9UHR6 403 aa14.7□□□□□ -0.06
RPS28-201ENST00000417088 RPL26L1Q9UNX3 145 aaKnown RBP14.7□□□□□ -0.06
RPS28-201ENST00000417088 TTLL3Q9Y4R7 772 aa14.7□□□□□ -0.06
RPS28-201ENST00000417088 MAST4O15021 2626 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 EFCAB7A8K855 629 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 HLA-DQB2P05538 268 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 LIFP15018 202 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 GJC1P36383 396 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 ZBED6P86452 979 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 NFKBIBQ15653 356 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 ANKRD20A8PQ5CZ79 823 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 ANKS6Q68DC2 871 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 ALKBH5Q6P6C2 394 aaKnown RBP14.69□□□□□ -0.06
RPS28-201ENST00000417088 IYDQ6PHW0 289 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 CHST15Q7LFX5 561 aaPredicted RBP14.69□□□□□ -0.06
RPS28-201ENST00000417088 ARHGAP22Q7Z5H3 698 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 BMPERQ8N8U9 685 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 KCTD6Q8NC69 237 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 OR10G6Q8NH81 332 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 AHCYL2Q96HN2 611 aaKnown RBP14.69□□□□□ -0.06
RPS28-201ENST00000417088 ZNF670Q9BS34 389 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 ASPSCR1Q9BZE9 553 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 SPRY4Q9C004 299 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 PCDH9Q9HC56 1237 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 TBC1D29Q9UFV1 150 aa14.69□□□□□ -0.06
RPS28-201ENST00000417088 ZFC3H1O60293 1989 aaKnown RBP14.69□□□□□ -0.06
RPS28-201ENST00000417088 A6NCN8 305 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 CYSRT1A8MQ03 144 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 A8MU76 341 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 FADS2P1A8MWK0 482 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 DUX1O43812 170 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 RAD1O60671 282 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 PPFIA2O75334 1257 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 CA4P22748 312 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 SPINT3P49223 89 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 PPM1FP49593 454 aaPredicted RBP14.68□□□□□ -0.06
RPS28-201ENST00000417088 RAB15P59190 212 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 FANCCQ00597 558 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 HHEXQ03014 270 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 GBE1Q04446 702 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 SLC10A2Q12908 348 aaPredicted RBP14.68□□□□□ -0.06
RPS28-201ENST00000417088 NFATC2Q13469 925 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 PDK2Q15119 407 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 QPCTQ16769 361 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 SNAP47Q5SQN1 464 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 DCAF12Q5T6F0 453 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 HENMT1Q5T8I9 393 aaKnown RBP14.68□□□□□ -0.06
RPS28-201ENST00000417088 CAVIN1Q6NZI2 390 aaKnown RBP14.68□□□□□ -0.06
RPS28-201ENST00000417088 WDR74Q6RFH5 385 aaPredicted RBP14.68□□□□□ -0.06
RPS28-201ENST00000417088 PQLC3Q8N755 202 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 ZNF564Q8TBZ8 553 aaPredicted RBP14.68□□□□□ -0.06
RPS28-201ENST00000417088 CPLX3Q8WVH0 158 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 FAF2Q96CS3 445 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 ZMYND15Q9H091 742 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 SLC25A18Q9H1K4 315 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 FAM83DQ9H4H8 585 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 SARS2Q9NP81 518 aaKnown RBP14.68□□□□□ -0.06
RPS28-201ENST00000417088 HAUS2Q9NVX0 235 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 PILRAQ9UKJ1 303 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 CAPN11Q9UMQ6 739 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 KCNK6Q9Y257 313 aa14.68□□□□□ -0.06
RPS28-201ENST00000417088 C1orf232A0A0U1RR37 186 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 ARHGAP6O43182 974 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 PROSCO94903 275 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 MMP2P08253 660 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 ACP5P13686 325 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 MX2P20592 715 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 TAS2R40P59535 323 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 MC2RQ01718 297 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 BORAQ6PGQ7 559 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 NCSTNQ92542 709 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 SH3KBP1Q96B97 665 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 RTP4Q96DX8 246 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 TEFMQ96QE5 360 aaKnown RBP14.67□□□□□ -0.06
RPS28-201ENST00000417088 CTRCQ99895 268 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 MLPHQ9BV36 600 aaPredicted RBP14.67□□□□□ -0.06
RPS28-201ENST00000417088 ADNPQ9H2P0 1102 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 RMI1Q9H9A7 625 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 NENFQ9UMX5 172 aa14.67□□□□□ -0.06
RPS28-201ENST00000417088 UBR5O95071 2799 aaPredicted RBP14.66□□□□□ -0.06
RPS28-201ENST00000417088 RGSL1A5PLK6 1076 aa14.66□□□□□ -0.06
RPS28-201ENST00000417088 ANKRD66B4E2M5 251 aa14.66□□□□□ -0.06
RPS28-201ENST00000417088 SNX2O60749 519 aa14.66□□□□□ -0.06
RPS28-201ENST00000417088 JCHAINP01591 159 aa14.66□□□□□ -0.06
RPS28-201ENST00000417088 CD86P42081 329 aa14.66□□□□□ -0.06
RPS28-201ENST00000417088 EPHA4P54764 986 aa14.66□□□□□ -0.06
RPS28-201ENST00000417088 LYSMD3Q7Z3D4 306 aa14.66□□□□□ -0.06
RPS28-201ENST00000417088 SLC9B2Q86UD5 537 aa14.66□□□□□ -0.06
RPS28-201ENST00000417088 MAP7D3Q8IWC1 876 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms