RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 UBASH3AP57075 661 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 RAB15P59190 212 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 HHEXQ03014 270 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 NIPAL4Q0D2K0 466 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 CHST15Q7LFX5 561 aaPredicted RBP14.32□□□□□ -0.12
PAF1-202ENST00000416728 LYSMD1Q96S90 227 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 FUCA2Q9BTY2 467 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 STN1Q9H668 368 aaKnown RBP14.32□□□□□ -0.12
PAF1-202ENST00000416728 CTTNBP2NLQ9P2B4 639 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 CAPN11Q9UMQ6 739 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 LUC7L2Q9Y383 392 aaKnown RBP14.32□□□□□ -0.12
PAF1-202ENST00000416728 PRKAB1Q9Y478 270 aa14.32□□□□□ -0.12
PAF1-202ENST00000416728 ASH1LQ9NR48 2969 aaKnown RBP14.31□□□□□ -0.12
PAF1-202ENST00000416728 EFCAB7A8K855 629 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 B4E171 279 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 DNAJC6O75061 913 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 PROSCO94903 275 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 EML2O95834 649 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 KRT7P08729 469 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 ITGB6P18564 788 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 TSPAN7P41732 249 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 SPINT3P49223 89 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 GBE1Q04446 702 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.31□□□□□ -0.12
PAF1-202ENST00000416728 ZFYVE27Q5T4F4 411 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 DCAF12Q5T6F0 453 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 LUZP1Q86V48 1076 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 CPNE8Q86YQ8 564 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 CACNA2D3Q8IZS8 1091 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 CCNYQ8ND76 341 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 CCHCR1Q8TD31 782 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 LRRN4Q8WUT4 740 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 SH3KBP1Q96B97 665 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 FAF2Q96CS3 445 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 HDAC11Q96DB2 347 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 ZNF830Q96NB3 372 aaPredicted RBP14.31□□□□□ -0.12
PAF1-202ENST00000416728 MLPHQ9BV36 600 aaPredicted RBP14.31□□□□□ -0.12
PAF1-202ENST00000416728 FAM83DQ9H4H8 585 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 RMI1Q9H9A7 625 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 CBX8Q9HC52 389 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 SARS2Q9NP81 518 aaKnown RBP14.31□□□□□ -0.12
PAF1-202ENST00000416728 OCIAD1Q9NX40 245 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 PKD2L2Q9NZM6 624 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 PDP2Q9P2J9 529 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 UVRAGQ9P2Y5 699 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 KCNK6Q9Y257 313 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 PCYT1BQ9Y5K3 369 aaPredicted RBP14.31□□□□□ -0.12
PAF1-202ENST00000416728 OAS3Q9Y6K5 1087 aaKnown RBP14.31□□□□□ -0.12
PAF1-202ENST00000416728 PIEZO2Q9H5I5 2752 aa14.31□□□□□ -0.12
PAF1-202ENST00000416728 PPFIA2O75334 1257 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 ACP5P13686 325 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 SLC2A4P14672 509 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 TAS2R40P59535 323 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 NFKB2Q00653 900 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 NFATC2Q13469 925 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 QPCTQ16769 361 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 SNAP47Q5SQN1 464 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 HENMT1Q5T8I9 393 aaKnown RBP14.3□□□□□ -0.12
PAF1-202ENST00000416728 ANKS6Q68DC2 871 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 IYDQ6PHW0 289 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 WDR74Q6RFH5 385 aaPredicted RBP14.3□□□□□ -0.12
PAF1-202ENST00000416728 ATG14Q6ZNE5 492 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 CCDC13Q8IYE1 715 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 PQLC3Q8N755 202 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 CTNNBL1Q8WYA6 563 aaPredicted RBP14.3□□□□□ -0.12
PAF1-202ENST00000416728 TEFMQ96QE5 360 aaKnown RBP14.3□□□□□ -0.12
PAF1-202ENST00000416728 WDR24Q96S15 920 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 HERPUD2Q9BSE4 406 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 SLC12A9Q9BXP2 914 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 ADGRE3Q9BY15 652 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 TRIM4Q9C037 500 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 DTLQ9NZJ0 730 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 TBC1D29Q9UFV1 150 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 LCMT1Q9UIC8 334 aa14.3□□□□□ -0.12
PAF1-202ENST00000416728 CNOT6Q9ULM6 557 aaKnown RBP14.3□□□□□ -0.12
PAF1-202ENST00000416728 SETXQ7Z333 2677 aaKnown RBP14.3□□□□□ -0.12
PAF1-202ENST00000416728 RGSL1A5PLK6 1076 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 A8MU76 341 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 FADS2P1A8MWK0 482 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 ANKRD66B4E2M5 251 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 KCNK1O00180 336 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 RAD1O60671 282 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 SNX2O60749 519 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 JCHAINP01591 159 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 GYPCP04921 128 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 H2AFZP0C0S5 128 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 LIFP15018 202 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 MAN1A1P33908 653 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 CD86P42081 329 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 CSRP3P50461 194 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 SLC10A2Q12908 348 aaPredicted RBP14.29□□□□□ -0.12
PAF1-202ENST00000416728 CLCA4Q14CN2 919 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 BORAQ6PGQ7 559 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 H2AFVQ71UI9 128 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 LYSMD3Q7Z3D4 306 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 SLC9B2Q86UD5 537 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 BMPERQ8N8U9 685 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 NCSTNQ92542 709 aa14.29□□□□□ -0.12
PAF1-202ENST00000416728 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.29□□□□□ -0.12
PAF1-202ENST00000416728 GEMIN8Q9NWZ8 242 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms