RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 POLR2EP19388 210 aaKnown RBP14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 RAB10P61026 200 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 NFYCQ13952 458 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 SNX17Q15036 470 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 HIST2H2ACQ16777 129 aaPredicted RBP14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 C6orf141Q5SZD1 244 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 AFG1LQ8WV93 481 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 EIF2B3Q9NR50 452 aaKnown RBP14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 GIMAP4Q9NUV9 329 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 PMF1-BGLAPU3KQ54 211 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 TANC1Q9C0D5 1861 aa14.66□□□□□ -0.06
NCKIPSD-204ENST00000416649 LRIG2O94898 1065 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 LCP1P13796 627 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 ATP5F1P24539 256 aaPredicted RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 SLC6A3Q01959 620 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 LIPEQ05469 1076 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 LDLRAD1Q5T700 205 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 EEF1DP3Q658K8 133 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 ANKRD34AQ69YU3 496 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 PLD3Q8IV08 490 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 SYTL1Q8IYJ3 562 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 HS3ST5Q8IZT8 346 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 C1orf127Q8N9H9 656 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 OSCP1Q8WVF1 389 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 TMBIM1Q969X1 311 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 LRRC58Q96CX6 371 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 VMP1Q96GC9 406 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 HOPXQ9BPY8 73 aaPredicted RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 EML4Q9HC35 981 aaKnown RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 TLR9Q9NR96 1032 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 IL37Q9NZH6 218 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 CPSF3Q9UKF6 684 aaKnown RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 TTC24A2A3L6 582 aaPredicted RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 ZSCAN5BA6NJL1 495 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 ZNF99A8MXY4 864 aaPredicted RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 H0YAE9 185 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 M0QX08 132 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 TBC1D4O60343 1298 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 VTNP04004 478 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 CD68P34810 354 aaPredicted RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 MAP2K4P45985 399 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 TAS2R39P59534 338 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 LAMTOR4Q0VGL1 99 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 SNAP47Q5SQN1 464 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 C8orf82Q6P1X6 216 aaPredicted RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 TTC23LQ6PF05 361 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 PSTKQ8IV42 348 aaKnown RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 REM2Q8IYK8 340 aaPredicted RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 OR13J1Q8NGT2 312 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 PTPN18Q99952 460 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 C6orf62Q9GZU0 229 aaPredicted RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 C2orf40Q9H1Z8 148 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 LRRC4Q9HBW1 653 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 CPNE5Q9HCH3 593 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 DPP3Q9NY33 737 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 AASSQ9UDR5 926 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 PARNO95453 639 aaKnown RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 PRKCBP05771 671 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 PRKCAP17252 672 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 RBM48Q5RL73 367 aaKnown RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 PPP1R26Q5T8A7 1209 aaPredicted RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 EFCAB12Q6NXP0 572 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 LYSMD2Q8IV50 215 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 FAM83FQ8NEG4 500 aaPredicted RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 RORBQ92753 470 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 RPL3LQ92901 407 aaKnown RBP14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 MUL1Q969V5 352 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 AKTIPQ9H8T0 292 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 PLEKHA5Q9HAU0 1116 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 ADPRHL2Q9NX46 363 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 HACD3Q9P035 362 aa14.65□□□□□ -0.06
NCKIPSD-204ENST00000416649 FXYD1O00168 92 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 RGS13O14921 159 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 HSD17B1P14061 328 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 ALOX12P18054 663 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 GPX3P22352 226 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 ARL2P36404 184 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 DAG1Q14118 895 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 CTU2Q2VPK5 515 aaKnown RBP14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 STEAP3Q658P3 488 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 ACOT1Q86TX2 421 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 DCP2Q8IU60 420 aaKnown RBP14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 ABI1Q8IZP0 508 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 ASCC1Q8N9N2 400 aaKnown RBP14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 CHDHQ8NE62 594 aaPredicted RBP14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZNF555Q8NEP9 628 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 MCFD2Q8NI22 146 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 FAM149B1Q96BN6 582 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 BIRC7Q96CA5 298 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 MS4A4AQ96JQ5 239 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 SH3GL1Q99961 368 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 BCO2Q9BYV7 579 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 ASPSCR1Q9BZE9 553 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 DSN1Q9H410 356 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 MINDY3Q9H8M7 445 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 HACD1B0YJ81 288 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZBTB24O43167 697 aaPredicted RBP14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 FYNP06241 537 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 PIGAP37287 484 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 PPP5CP53041 499 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms