RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 INO80CQ6PI98 192 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 NPNTQ6UXI9 565 aa17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 AGAP3Q96P47 875 aa17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 CCNL2Q96S94 520 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 B3GNT4Q9C0J1 378 aa17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 ZFYVE1Q9HBF4 777 aa17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 SEPT10Q9P0V9 454 aa17.45■□□□□ 0.38
PDLIM2-208ENST00000416159 HGSO14964 777 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 SPOPO43791 374 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 PRB1P04280 392 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 ATP1A1P05023 1023 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 TNNT1P13805 278 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 ITIH1P19827 911 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 COMTP21964 271 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 NR2C2P49116 596 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 CDK18Q07002 472 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 TBX2Q13207 712 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 TRA2AQ13595 282 aaKnown RBP eCLIP17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 TFDP2Q14188 446 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 GALNT3Q14435 633 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 TEX44Q53QW1 395 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 MFSD7Q6UXD7 560 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 ZNF574Q6ZN55 896 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 LYSMD3Q7Z3D4 306 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 USP7Q93009 1102 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 TRIB3Q96RU7 358 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 NUDT22Q9BRQ3 303 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 CEP41Q9BYV8 373 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 MAGEE1Q9HCI5 957 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 RAD18Q9NS91 495 aa17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 OAS3Q9Y6K5 1087 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-208ENST00000416159 IGHV1OR21-1A0A087WYE8 117 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 IGHV5-10-1A0A0J9YXX1 117 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 FADS2P1A8MWK0 482 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 AGRPO00253 132 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 LIPCP11150 499 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 CD82P27701 267 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 ETV5P41161 510 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 FASLGP48023 281 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 LIMK2P53671 638 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 MAPK10P53779 464 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 DYNLT1P63172 113 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 C16orf72Q14CZ0 275 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 TMEM164Q5U3C3 297 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 CCDC70Q6NSX1 233 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 PCSK4Q6UW60 755 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 CHST15Q7LFX5 561 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 KDELC2Q7Z4H8 507 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 OR4D9Q8NGE8 314 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 TADA1Q96BN2 335 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 SRPK1Q96SB4 655 aaKnown RBP17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 SPATA16Q9BXB7 569 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 CARD9Q9H257 536 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 GLOD4Q9HC38 313 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 WDR70Q9NW82 654 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 KCNK4Q9NYG8 393 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 HYOU1Q9Y4L1 999 aa17.43■□□□□ 0.38
PDLIM2-208ENST00000416159 TRBV23OR9-2A0A075B6M9 112 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 PRAMEF33A0A0G2JMD5 474 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 PSTPIP1O43586 416 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 PRAMEF10O60809 474 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 SLC2A4P14672 509 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 CDKN2BP42772 138 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 MAGEA1P43355 309 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 NOP2P46087 812 aaKnown RBP17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 HADHBP55084 474 aaKnown RBP17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 DCDC1P59894 354 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 GPLD1P80108 840 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 NKAIN2Q5VXU1 208 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 TMC3Q7Z5M5 1100 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 SFRP1Q8N474 314 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 SLC37A2Q8TED4 501 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 EID2BQ96D98 161 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 CCDC74BQ96LY2 380 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 SLC38A3Q99624 504 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 GPR63Q9BZJ6 419 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 STN1Q9H668 368 aaKnown RBP17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 SHOC2Q9UQ13 582 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 PRKAB1Q9Y478 270 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 ALG6Q9Y672 507 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 LOC400499M0QZD8 3231 aa17.42■□□□□ 0.38
PDLIM2-208ENST00000416159 A0A0A6YYK5 440 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 GRID2O43424 1007 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 NUAK1O60285 661 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 C1QL1O75973 258 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 NDST3O95803 873 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 PTPN3P26045 913 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 CFHR1Q03591 330 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 PRKD1Q15139 912 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 PCSK7Q16549 785 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 TAZQ16635 292 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 ZNF569Q5MCW4 686 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 FAM182AQ5T1J6 154 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 PDPK2PQ6A1A2 396 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 TMEM71Q6P5X7 295 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 IYDQ6PHW0 289 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 SARM1Q6SZW1 724 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 TRAM1L1Q8N609 369 aa17.41■□□□□ 0.38
PDLIM2-208ENST00000416159 GPR26Q8NDV2 337 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms