RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 AGAP3Q96P47 875 aa15.43■□□□□ 0.06
ACTB-202ENST00000414620 CCNL2Q96S94 520 aaPredicted RBP15.43■□□□□ 0.06
ACTB-202ENST00000414620 SEMA4CQ9C0C4 833 aa15.43■□□□□ 0.06
ACTB-202ENST00000414620 TSPY26PQ9H489 355 aa15.43■□□□□ 0.06
ACTB-202ENST00000414620 ARFGAP3Q9NP61 516 aa15.43■□□□□ 0.06
ACTB-202ENST00000414620 ZNHIT2Q9UHR6 403 aa15.43■□□□□ 0.06
ACTB-202ENST00000414620 KCNK6Q9Y257 313 aa15.43■□□□□ 0.06
ACTB-202ENST00000414620 FASNP49327 2511 aaKnown RBP15.42■□□□□ 0.06
ACTB-202ENST00000414620 ANKRD66B4E2M5 251 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 C9orf172C9J069 976 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 DNAJC6O75061 913 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 LIPCP11150 499 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 CCL4P13236 92 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 CD1CP29017 333 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 NOP2P46087 812 aaKnown RBP15.42■□□□□ 0.06
ACTB-202ENST00000414620 RPL26P61254 145 aaKnown RBP15.42■□□□□ 0.06
ACTB-202ENST00000414620 PEX6Q13608 980 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 LLGL1Q15334 1064 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 ODF2Q5BJF6 829 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 ZNF648Q5T619 568 aaPredicted RBP15.42■□□□□ 0.06
ACTB-202ENST00000414620 HENMT1Q5T8I9 393 aaKnown RBP15.42■□□□□ 0.06
ACTB-202ENST00000414620 VASH2Q86V25 355 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 RHOT2Q8IXI1 618 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 LSM14AQ8ND56 463 aaKnown RBP15.42■□□□□ 0.06
ACTB-202ENST00000414620 CCHCR1Q8TD31 782 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 SLC37A2Q8TED4 501 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 TMEM159Q96B96 161 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 LYSMD1Q96S90 227 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 FAM83DQ9H4H8 585 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 KCNK4Q9NYG8 393 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 TMEM9Q9P0T7 183 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 CNOT6Q9ULM6 557 aaKnown RBP15.42■□□□□ 0.06
ACTB-202ENST00000414620 RPL26L1Q9UNX3 145 aaKnown RBP15.42■□□□□ 0.06
ACTB-202ENST00000414620 SHOC2Q9UQ13 582 aa15.42■□□□□ 0.06
ACTB-202ENST00000414620 IGHV1OR21-1A0A087WYE8 117 aa15.41■□□□□ 0.06
ACTB-202ENST00000414620 IGHV5-10-1A0A0J9YXX1 117 aa15.41■□□□□ 0.06
ACTB-202ENST00000414620 PPP1R12AO14974 1030 aaPredicted RBP15.41■□□□□ 0.06
ACTB-202ENST00000414620 NVLO15381 856 aaKnown RBP15.41■□□□□ 0.06
ACTB-202ENST00000414620 EFSO43281 561 aa15.41■□□□□ 0.06
ACTB-202ENST00000414620 ACP5P13686 325 aa15.41■□□□□ 0.06
ACTB-202ENST00000414620 ARHGAP25P42331 645 aa15.41■□□□□ 0.06
ACTB-202ENST00000414620 NLRP8Q86W28 1048 aa15.41■□□□□ 0.06
ACTB-202ENST00000414620 SNRNP27Q8WVK2 155 aaKnown RBP15.41■□□□□ 0.06
ACTB-202ENST00000414620 JPH3Q8WXH2 748 aaPredicted RBP15.41■□□□□ 0.06
ACTB-202ENST00000414620 PMEPA1Q969W9 287 aa15.41■□□□□ 0.06
ACTB-202ENST00000414620 OLFM3Q96PB7 478 aa15.41■□□□□ 0.06
ACTB-202ENST00000414620 ADGRE3Q9BY15 652 aa15.41■□□□□ 0.06
ACTB-202ENST00000414620 AKAP7Q9P0M2 348 aaPredicted RBP15.41■□□□□ 0.06
ACTB-202ENST00000414620 MGAQ8IWI9 3026 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 ZNF487B1APH4 448 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 ZW10O43264 779 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 SPOPO43791 374 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 SNX2O60749 519 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 MTA2O94776 668 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 ZIC2O95409 532 aaPredicted RBP15.4■□□□□ 0.06
ACTB-202ENST00000414620 MT-CYBP00156 380 aaPredicted RBP15.4■□□□□ 0.06
ACTB-202ENST00000414620 COMTP21964 271 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 GPR3P46089 330 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 LRP8Q14114 963 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 PDK1Q15118 436 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 SKOR2Q2VWA4 1001 aaPredicted RBP15.4■□□□□ 0.06
ACTB-202ENST00000414620 PLA2G4EQ3MJ16 856 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 MANEAQ5SRI9 462 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 MFSD7Q6UXD7 560 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 NT5DC3Q86UY8 548 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 RHOT1Q8IXI2 618 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 SPATA22Q8NHS9 363 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 EID2BQ96D98 161 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 IMP4Q96G21 291 aaKnown RBP15.4■□□□□ 0.06
ACTB-202ENST00000414620 AHCYL2Q96HN2 611 aaKnown RBP15.4■□□□□ 0.06
ACTB-202ENST00000414620 TRIB3Q96RU7 358 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 SLC38A3Q99624 504 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 SPATA16Q9BXB7 569 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 GOLPH3Q9H4A6 298 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 ZFYVE1Q9HBF4 777 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 VPS18Q9P253 973 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 TBC1D29Q9UFV1 150 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 ACSL6Q9UKU0 697 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 ZNF711Q9Y462 761 aa15.4■□□□□ 0.06
ACTB-202ENST00000414620 F5H423 210 aaPredicted RBP15.39■□□□□ 0.05
ACTB-202ENST00000414620 THRAP10827 490 aa15.39■□□□□ 0.05
ACTB-202ENST00000414620 MAPK9P45984 424 aa15.39■□□□□ 0.05
ACTB-202ENST00000414620 LIMK2P53671 638 aa15.39■□□□□ 0.05
ACTB-202ENST00000414620 NFATC2Q13469 925 aa15.39■□□□□ 0.05
ACTB-202ENST00000414620 ZNF569Q5MCW4 686 aa15.39■□□□□ 0.05
ACTB-202ENST00000414620 SNAP47Q5SQN1 464 aa15.39■□□□□ 0.05
ACTB-202ENST00000414620 KAZNQ674X7 775 aa15.39■□□□□ 0.05
ACTB-202ENST00000414620 CRTC3Q6UUV7 619 aa15.39■□□□□ 0.05
ACTB-202ENST00000414620 DDX56Q9NY93 547 aaKnown RBP15.39■□□□□ 0.05
ACTB-202ENST00000414620 UBP1Q9NZI7 540 aa15.39■□□□□ 0.05
ACTB-202ENST00000414620 ATXN10Q9UBB4 475 aa15.39■□□□□ 0.05
ACTB-202ENST00000414620 SAE1Q9UBE0 346 aaPredicted RBP15.39■□□□□ 0.05
ACTB-202ENST00000414620 AHCTF1Q8WYP5 2266 aa15.39■□□□□ 0.05
ACTB-202ENST00000414620 A8MU76 341 aa15.38■□□□□ 0.05
ACTB-202ENST00000414620 AKR1B15C9JRZ8 316 aaPredicted RBP15.38■□□□□ 0.05
ACTB-202ENST00000414620 HGSO14964 777 aaPredicted RBP15.38■□□□□ 0.05
ACTB-202ENST00000414620 GRID2O43424 1007 aa15.38■□□□□ 0.05
ACTB-202ENST00000414620 PMPCBO75439 489 aa15.38■□□□□ 0.05
ACTB-202ENST00000414620 FGF3P11487 239 aaPredicted RBP15.38■□□□□ 0.05
ACTB-202ENST00000414620 PECAM1P16284 738 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms