RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 MC1RQ01726 317 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 NFATC2Q13469 925 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 SMTNL2Q2TAL5 461 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 DEFB109BQ30KR1 87 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 LACTB2Q53H82 288 aaPredicted RBP12.05□□□□□ -0.48
LIMS2-210ENST00000413578 SNAP47Q5SQN1 464 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 E4F1Q66K89 784 aaPredicted RBP12.05□□□□□ -0.48
LIMS2-210ENST00000413578 BBS5Q8N3I7 341 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 ATPAF2Q8N5M1 289 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 NCSTNQ92542 709 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 LYSMD1Q96S90 227 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 HERPUD2Q9BSE4 406 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 RIOK2Q9BVS4 552 aaKnown RBP12.05□□□□□ -0.48
LIMS2-210ENST00000413578 EPB41L1Q9H4G0 881 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 OGFRQ9NZT2 677 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 PRKAB1Q9Y478 270 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 KCNMB2Q9Y691 235 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 SPTBN1Q01082 2364 aaKnown RBP12.05□□□□□ -0.48
LIMS2-210ENST00000413578 KIR2DS5A0A0G2JLQ3 304 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 A0A0G2JNG1 304 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 PRR19A6NJB7 356 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 K7EM74 188 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 KIR2DS3K7RE56 304 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 DDX3XO00571 662 aaKnown RBP eCLIP12.04□□□□□ -0.48
LIMS2-210ENST00000413578 INPP4BO15327 924 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 C9P02748 559 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 ATP1A1P05023 1023 aaKnown RBP12.04□□□□□ -0.48
LIMS2-210ENST00000413578 RARAP10276 462 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 IL4RP24394 825 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 ARL4AP40617 200 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 PRKCIP41743 596 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 MYL5Q02045 173 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 KIR2DS5Q14953 304 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 BOLA3Q53S33 107 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 HENMT1Q5T8I9 393 aaKnown RBP12.04□□□□□ -0.48
LIMS2-210ENST00000413578 TXNRD3NBQ6F5E7 133 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 ZNF571Q7Z3V5 609 aaPredicted RBP12.04□□□□□ -0.48
LIMS2-210ENST00000413578 SLC9B2Q86UD5 537 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 ESX1Q8N693 406 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 MAML1Q92585 1016 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 SH3KBP1Q96B97 665 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 TDRD1Q9BXT4 1180 aaKnown RBP12.04□□□□□ -0.48
LIMS2-210ENST00000413578 UCK1Q9HA47 277 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 PCDH18Q9HCL0 1135 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 NT5MQ9NPB1 228 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.04□□□□□ -0.48
LIMS2-210ENST00000413578 CHMP5Q9NZZ3 219 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 CNOT8Q9UFF9 292 aaKnown RBP12.04□□□□□ -0.48
LIMS2-210ENST00000413578 TP53TG5Q9Y2B4 290 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 ADGRG1Q9Y653 693 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 MRPS18BQ9Y676 258 aaKnown RBP12.04□□□□□ -0.48
LIMS2-210ENST00000413578 RPS6KL1Q9Y6S9 549 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 SCINQ9Y6U3 715 aa12.04□□□□□ -0.48
LIMS2-210ENST00000413578 GOLGA6L3A6NEY3 463 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 LRRC53A6NM62 1247 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 FADS2P1A8MWK0 482 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 POLR1CO15160 346 aaPredicted RBP12.03□□□□□ -0.48
LIMS2-210ENST00000413578 CLDN7O95471 211 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 FTLP02792 175 aaPredicted RBP12.03□□□□□ -0.48
LIMS2-210ENST00000413578 F3P13726 295 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 ZNF28P17035 718 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 TCN2P20062 427 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 NR1D1P20393 614 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 SERPINB6P35237 376 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 CLCNKAP51800 687 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 GFERP55789 205 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 SLC25A11Q02978 314 aaKnown RBP12.03□□□□□ -0.48
LIMS2-210ENST00000413578 KLRB1Q12918 225 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 TCTN3Q6NUS6 607 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 CHST15Q7LFX5 561 aaPredicted RBP12.03□□□□□ -0.48
LIMS2-210ENST00000413578 LYSMD3Q7Z3D4 306 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 LRRC49Q8IUZ0 686 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 ANKRD20A12PQ8NF67 263 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 ARRDC2Q8TBH0 407 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 FAM71BQ8TC56 605 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 NSMCE1Q8WV22 266 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 TEKT4Q8WW24 435 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 TBC1D10AQ9BXI6 508 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.03□□□□□ -0.48
LIMS2-210ENST00000413578 POLR1EQ9GZS1 481 aaKnown RBP12.03□□□□□ -0.48
LIMS2-210ENST00000413578 ZMYND15Q9H091 742 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 STN1Q9H668 368 aaKnown RBP12.03□□□□□ -0.48
LIMS2-210ENST00000413578 HAUS4Q9H6D7 363 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 RMI1Q9H9A7 625 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 AIPL1Q9NZN9 384 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 CPNE7Q9UBL6 633 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 ZNHIT2Q9UHR6 403 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 DNPEPQ9ULA0 475 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 KCNK6Q9Y257 313 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 KCTD3Q9Y597 815 aa12.03□□□□□ -0.48
LIMS2-210ENST00000413578 MYO9AB2RTY4 2548 aa12.02□□□□□ -0.48
LIMS2-210ENST00000413578 OR5K4A6NMS3 321 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 MTSS1O43312 755 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 NUAK1O60285 661 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 ASMTLO95671 621 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 FURINP09958 794 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 ACP5P13686 325 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 RPL26P61254 145 aaKnown RBP12.02□□□□□ -0.49
LIMS2-210ENST00000413578 DSC2Q02487 901 aa12.02□□□□□ -0.49
LIMS2-210ENST00000413578 SEPT6Q14141 434 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms