RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 UCK2Q9BZX2 261 aa5.22□□□□□ -1.57
HERC4-205ENST00000412272 ZNF700Q9H0M5 742 aa5.22□□□□□ -1.57
HERC4-205ENST00000412272 CCDC86Q9H6F5 360 aaKnown RBP5.22□□□□□ -1.57
HERC4-205ENST00000412272 GLOD4Q9HC38 313 aa5.22□□□□□ -1.57
HERC4-205ENST00000412272 ZSWIM5Q9P217 1185 aa5.22□□□□□ -1.57
HERC4-205ENST00000412272 POLLQ9UGP5 575 aa5.22□□□□□ -1.57
HERC4-205ENST00000412272 ITGA11Q9UKX5 1188 aa5.22□□□□□ -1.57
HERC4-205ENST00000412272 TMPRSS11EQ9UL52 423 aa5.22□□□□□ -1.57
HERC4-205ENST00000412272 CCDC61Q9Y6R9 512 aa5.22□□□□□ -1.57
HERC4-205ENST00000412272 MYH9P35579 1960 aaKnown RBP5.22□□□□□ -1.57
HERC4-205ENST00000412272 NCF1BA6NI72 391 aaPredicted RBP5.21□□□□□ -1.57
HERC4-205ENST00000412272 NCF1CA8MVU1 366 aaPredicted RBP5.21□□□□□ -1.57
HERC4-205ENST00000412272 B2RBV5 119 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 H7C0S8 307 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 CRTAPO75718 401 aaPredicted RBP5.21□□□□□ -1.57
HERC4-205ENST00000412272 YES1P07947 543 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 BMP8BP34820 402 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 SERPINB9P50453 376 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 CLCN5P51795 746 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 PSMD4P55036 377 aaKnown RBP5.21□□□□□ -1.57
HERC4-205ENST00000412272 MFAP3P55082 362 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 RNASE9P60153 205 aaKnown RBP5.21□□□□□ -1.57
HERC4-205ENST00000412272 PPIL2Q13356 520 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 PON3Q15166 354 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 DHCR24Q15392 516 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 SSX2Q16385 188 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 PPP1R18Q6NYC8 613 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 CCDC137Q6PK04 289 aaKnown RBP5.21□□□□□ -1.57
HERC4-205ENST00000412272 RAB11FIP2Q7L804 512 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 BMP8AQ7Z5Y6 402 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 LIX1LQ8IVB5 337 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 KIAA0319LQ8IZA0 1049 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 CMASQ8NFW8 434 aaPredicted RBP5.21□□□□□ -1.57
HERC4-205ENST00000412272 OR10J5Q8NHC4 309 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 ZFP90Q8TF47 636 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 ATG4CQ96DT6 458 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 DMRTB1Q96MA1 342 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 BDH2Q9BUT1 245 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 GPR62Q9BZJ7 368 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 QRSL1Q9H0R6 528 aaKnown RBP5.21□□□□□ -1.57
HERC4-205ENST00000412272 OPN3Q9H1Y3 402 aaPredicted RBP5.21□□□□□ -1.57
HERC4-205ENST00000412272 TTYH1Q9H313 450 aaPredicted RBP5.21□□□□□ -1.57
HERC4-205ENST00000412272 LDAHQ9H6V9 325 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 TDRD3Q9H7E2 651 aaKnown RBP5.21□□□□□ -1.57
HERC4-205ENST00000412272 DNAJC28Q9NX36 388 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 GDE1Q9NZC3 331 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 CD300AQ9UGN4 299 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 RIMS3Q9UJD0 308 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 STOML2Q9UJZ1 356 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 SAMHD1Q9Y3Z3 626 aaKnown RBP5.21□□□□□ -1.57
HERC4-205ENST00000412272 PMF1-BGLAPU3KQ54 211 aa5.21□□□□□ -1.57
HERC4-205ENST00000412272 M0R2N6 131 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 FCHO1O14526 889 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 TOX3O15405 576 aaPredicted RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 CPNE3O75131 537 aaKnown RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 PSMC3P17980 439 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 KIR3DL2P43630 455 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 GNPDA1P46926 289 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 PREPP48147 710 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 CCR9P51686 369 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 SLC26A5P58743 744 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 ARID5AQ03989 594 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 DCAF17Q5H9S7 520 aaPredicted RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 ZNF544Q6NX49 715 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 POLNQ7Z5Q5 900 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 ADGRG3Q86Y34 549 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 SLC9A9Q8IVB4 645 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 OR56B2PQ8NGI1 322 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 MZB1Q8WU39 189 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 ZNF597Q96LX8 424 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 ZNF558Q96NG5 402 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 OR52B2Q96RD2 323 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 NAT9Q9BTE0 207 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 THTPAQ9BU02 230 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 GTPBP2Q9BX10 602 aaKnown RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 ZYG11BQ9C0D3 744 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 SEMA6AQ9H2E6 1030 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 VRTNQ9H8Y1 702 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 GPN2Q9H9Y4 310 aaPredicted RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 CCM2LQ9NUG4 571 aaPredicted RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 RCOR3Q9P2K3 495 aaPredicted RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 NFKBIL1Q9UBC1 381 aaPredicted RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 SLCO3A1Q9UIG8 710 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 CDH22Q9UJ99 828 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 PLCL2Q9UPR0 1127 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 LIPT1Q9Y234 373 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 SLC22A14Q9Y267 594 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 ASB4Q9Y574 426 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 FER1L6Q2WGJ9 1857 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 LOC100653049A0A140TA62 436 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 MARCH11A6NNE9 402 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 ZBBXA8MT70 800 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 NKRFO15226 690 aaKnown RBP eCLIP5.21□□□□□ -1.58
HERC4-205ENST00000412272 SMAD6O43541 496 aaKnown RBP5.21□□□□□ -1.58
HERC4-205ENST00000412272 SPAG6O75602 509 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 KRT34O76011 436 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 BEST1O76090 585 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 SERPINA6P08185 405 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 H2AFZP0C0S5 128 aa5.21□□□□□ -1.58
HERC4-205ENST00000412272 SMIM6P0DI80 62 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms