RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 PCYT1BQ9Y5K3 369 aaPredicted RBP14.13□□□□□ -0.15
HLA-DQB2-229ENST00000411527 POLR1CO15160 346 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 SNX2O60749 519 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 DNAJC6O75061 913 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CLDN7O95471 211 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TCN2P20062 427 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 NOP2P46087 812 aaKnown RBP14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 STC1P52823 247 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 MC1RQ01726 317 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ATP1A1-AS1Q5TC04 95 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 RBM43Q6ZSC3 357 aaKnown RBP14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 SLC9B2Q86UD5 537 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TEX26Q8N6G2 289 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 STARD8Q92502 1023 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 POLR1EQ9GZS1 481 aaKnown RBP14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 HSD3B7Q9H2F3 369 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 VPS18Q9P253 973 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 KCNK6Q9Y257 313 aa14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 OAS3Q9Y6K5 1087 aaKnown RBP14.12□□□□□ -0.15
HLA-DQB2-229ENST00000411527 FLNCQ14315 2725 aa14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 DDX3XO00571 662 aaKnown RBP eCLIP14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 NTRK1P04629 796 aa14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 GP1BBP13224 206 aa14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ACP5P13686 325 aa14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 EPHA4P54764 986 aa14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 SEPT6Q14141 434 aa14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 IHHQ14623 411 aa14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TXNRD3NBQ6F5E7 133 aa14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 LYSMD3Q7Z3D4 306 aa14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TBC1D10AQ9BXI6 508 aa14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 PCDH18Q9HCL0 1135 aa14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CNOT6Q9ULM6 557 aaKnown RBP14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CHKBQ9Y259 395 aa14.11□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CLEC18AA5D8T8 446 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 DLGAP3O95886 979 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 MYBL1P10243 752 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 F3P13726 295 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 SLC2A4P14672 509 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CES1P23141 567 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 STAT5AP42229 794 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 DSC2Q02487 901 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 STX1AQ16623 288 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 LACTB2Q53H82 288 aaPredicted RBP14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CLEC18BQ6UXF7 455 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 LRRC49Q8IUZ0 686 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ESX1Q8N693 406 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CLEC18CQ8NCF0 446 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TEKT4Q8WW24 435 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 RNF31Q96EP0 1072 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TRIM11Q96F44 468 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 WDR24Q96S15 920 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 HERPUD2Q9BSE4 406 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 AIPL1Q9NZN9 384 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 DNPEPQ9ULA0 475 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 PLAAQ9Y263 795 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 MAN2B2Q9Y2E5 1009 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TTLL3Q9Y4R7 772 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 MRPS18BQ9Y676 258 aaKnown RBP14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 RPS6KL1Q9Y6S9 549 aa14.1□□□□□ -0.15
HLA-DQB2-229ENST00000411527 KIR2DS5A0A0G2JLQ3 304 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 A0A0G2JNG1 304 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 A6NCN8 305 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 PRR19A6NJB7 356 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 OR5K4A6NMS3 321 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 FADS2P1A8MWK0 482 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 KIR2DS3K7RE56 304 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 PRLP01236 227 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 SKILP12757 684 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 F8A1P23610 371 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 PRKCIP41743 596 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ZNF165P49910 485 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 FOXM1Q08050 763 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 KLHL30Q0D2K2 578 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 KLRB1Q12918 225 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 MMRN1Q13201 1228 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 PIGHQ14442 188 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 KRT81Q14533 505 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 KIR2DS5Q14953 304 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CRTC2Q53ET0 693 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CCDC122Q5T0U0 273 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 E4F1Q66K89 784 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 PLXDC1Q8IUK5 500 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 RAVER1Q8IY67 606 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 LPCAT1Q8NF37 534 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TDRD1Q9BXT4 1180 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ISCUQ9H1K1 167 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 EPB41L1Q9H4G0 881 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 FAM83DQ9H4H8 585 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 RMI1Q9H9A7 625 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 RTN4Q9NQC3 1192 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 PRDM8Q9NQV8 689 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 RBM22Q9NW64 420 aaKnown RBP eCLIP14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 CPNE7Q9UBL6 633 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 TP53TG5Q9Y2B4 290 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 PCDHB3Q9Y5E6 796 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 KCNMB2Q9Y691 235 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 NBASA2RRP1 2371 aa14.09□□□□□ -0.15
HLA-DQB2-229ENST00000411527 ZNF106Q9H2Y7 1883 aaKnown RBP14.08□□□□□ -0.16
HLA-DQB2-229ENST00000411527 C1orf232A0A0U1RR37 186 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms