RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 SMIM14Q96QK8 99 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 POLR1EQ9GZS1 481 aaKnown RBP16.57■□□□□ 0.24
MRPL55-220ENST00000411464 VPS18Q9P253 973 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 TBC1D29Q9UFV1 150 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 KLHL3Q9UH77 587 aa16.57■□□□□ 0.24
MRPL55-220ENST00000411464 SDK2Q58EX2 2172 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 SNX2O60749 519 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 DNAJC6O75061 913 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 RARAP10276 462 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 TCF4P15884 667 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 TCN2P20062 427 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 STC1P52823 247 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 EPHA4P54764 986 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 KLHL30Q0D2K2 578 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 PIGHQ14442 188 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-220ENST00000411464 STX1AQ16623 288 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 C16orf46Q6P387 395 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 RAVER1Q8IY67 606 aaKnown RBP16.56■□□□□ 0.24
MRPL55-220ENST00000411464 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.56■□□□□ 0.24
MRPL55-220ENST00000411464 STARD8Q92502 1023 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 HERPUD2Q9BSE4 406 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 EPB41L1Q9H4G0 881 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 RMI1Q9H9A7 625 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 PCDH18Q9HCL0 1135 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 APMAPQ9HDC9 416 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 LMBRD1Q9NUN5 540 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 HAUS2Q9NVX0 235 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 AIPL1Q9NZN9 384 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 KCNK6Q9Y257 313 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 CHKBQ9Y259 395 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 TMEM184BQ9Y519 407 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-220ENST00000411464 PTPN13Q12923 2485 aa16.56■□□□□ 0.24
MRPL55-220ENST00000411464 FLNCQ14315 2725 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 ARHGEF17Q96PE2 2063 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-220ENST00000411464 DDX3XO00571 662 aaKnown RBP eCLIP16.55■□□□□ 0.243e-7■■□□□ 12.9
MRPL55-220ENST00000411464 CLDN7O95471 211 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 ACP5P13686 325 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 CA4P22748 312 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 OAS2P29728 719 aaKnown RBP16.55■□□□□ 0.24
MRPL55-220ENST00000411464 KRT81Q14533 505 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 LACTB2Q53H82 288 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-220ENST00000411464 CCDC122Q5T0U0 273 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 LYSMD3Q7Z3D4 306 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 PLXDC1Q8IUK5 500 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 ESX1Q8N693 406 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 AVL9Q8NBF6 648 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 TEKT4Q8WW24 435 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 TTLL3Q9Y4R7 772 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 PCDHB3Q9Y5E6 796 aa16.55■□□□□ 0.24
MRPL55-220ENST00000411464 KIR2DS5A0A0G2JLQ3 304 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 A0A0G2JNG1 304 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 OR5K4A6NMS3 321 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 KIR2DS3K7RE56 304 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 GP1BBP13224 206 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 F3P13726 295 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 ZNF165P49910 485 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 RPL26P61254 145 aaKnown RBP16.54■□□□□ 0.24
MRPL55-220ENST00000411464 DSC2Q02487 901 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 FOXM1Q08050 763 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 KIR2DS5Q14953 304 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 CRTC2Q53ET0 693 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-220ENST00000411464 TIGD7Q6NT04 549 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-220ENST00000411464 HSD3B7Q9H2F3 369 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 FAM83DQ9H4H8 585 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 RBM22Q9NW64 420 aaKnown RBP eCLIP16.54■□□□□ 0.248e-13■■■□□ 15.5
MRPL55-220ENST00000411464 CPNE7Q9UBL6 633 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 CNOT6Q9ULM6 557 aaKnown RBP16.54■□□□□ 0.24
MRPL55-220ENST00000411464 RPL26L1Q9UNX3 145 aaKnown RBP16.54■□□□□ 0.24
MRPL55-220ENST00000411464 KCTD3Q9Y597 815 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 PCYT1BQ9Y5K3 369 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-220ENST00000411464 OAS3Q9Y6K5 1087 aaKnown RBP16.54■□□□□ 0.24
MRPL55-220ENST00000411464 RPS6KL1Q9Y6S9 549 aa16.54■□□□□ 0.24
MRPL55-220ENST00000411464 C1orf232A0A0U1RR37 186 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 PRR19A6NJB7 356 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 MATN3O15232 486 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 GARSP41250 739 aaKnown RBP16.53■□□□□ 0.24
MRPL55-220ENST00000411464 PRKCIP41743 596 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 STAT5AP42229 794 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 KLRB1Q12918 225 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 MAP7Q14244 749 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 TXNRD3NBQ6F5E7 133 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 PHYKPLQ8IUZ5 450 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 LPCAT1Q8NF37 534 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 CCHCR1Q8TD31 782 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 TBC1D10AQ9BXI6 508 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 TDRD1Q9BXT4 1180 aaKnown RBP16.53■□□□□ 0.24
MRPL55-220ENST00000411464 ULBP3Q9BZM4 244 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 ISCUQ9H1K1 167 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 PCDH9Q9HC56 1237 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 RTN4Q9NQC3 1192 aaKnown RBP16.53■□□□□ 0.24
MRPL55-220ENST00000411464 RCOR3Q9P2K3 495 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-220ENST00000411464 IP6K2Q9UHH9 426 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 AMACRQ9UHK6 382 aa16.53■□□□□ 0.24
MRPL55-220ENST00000411464 RGSL1A5PLK6 1076 aa16.52■□□□□ 0.24
MRPL55-220ENST00000411464 A6NCN8 305 aa16.52■□□□□ 0.24
MRPL55-220ENST00000411464 GRID2O43424 1007 aa16.52■□□□□ 0.24
MRPL55-220ENST00000411464 DLGAP3O95886 979 aa16.52■□□□□ 0.24
MRPL55-220ENST00000411464 PRLP01236 227 aa16.52■□□□□ 0.24
MRPL55-220ENST00000411464 SKILP12757 684 aa16.52■□□□□ 0.24
MRPL55-220ENST00000411464 IL4RP24394 825 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms