RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 CHST15Q7LFX5 561 aaPredicted RBP0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 ZBTB46Q86UZ6 589 aa0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 ZNF354CQ86Y25 554 aa0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 H1FOOQ8IZA3 346 aaPredicted RBP0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 MAML2Q8IZL2 1156 aaPredicted RBP0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 NUS1Q96E22 293 aa0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 BARD1Q99728 777 aaKnown RBP0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 ZNF577Q9BSK1 485 aa0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 DDX24Q9GZR7 859 aaKnown RBP eCLIP0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 ABCD2Q9UBJ2 740 aa0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 IP6K2Q9UHH9 426 aa0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 TSPAN16Q9UKR8 245 aa0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 ZNF510Q9Y2H8 683 aa0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 KLHL20Q9Y2M5 609 aa0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 DTNAQ9Y4J8 743 aa0.29□□□□□ -2.36
RNU6-554P-201ENST00000410466 A0A087WWV3 80 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 C17orf100A8MU93 164 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 ZNF197O14709 1029 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 KLF11O14901 512 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 HBP1O60381 514 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 GLP2RO95838 553 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 SERPINC1P01008 464 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 ANXA6P08133 673 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 MCCP23508 829 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 ELF1P32519 619 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 DDIT3P35638 169 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 MMP12P39900 470 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 SOX3P41225 446 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 RAD23BP54727 409 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 EVA1CP58658 441 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 OLIG2Q13516 323 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 RUNX2Q13950 521 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 ASPRV1Q53RT3 343 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 RINT1Q6NUQ1 792 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 KLHL17Q6TDP4 642 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 SLC16A9Q7RTY1 509 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 LONP2Q86WA8 852 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 HACE1Q8IYU2 909 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 GJC3Q8NFK1 279 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 ZNF519Q8TB69 540 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 MRAPQ8TCY5 172 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 LRRC15Q8TF66 581 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 SLCO2A1Q92959 643 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 CHMP4CQ96CF2 233 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 NTNG2Q96CW9 530 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 PRMT6Q96LA8 375 aaPredicted RBP0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 AIFM3Q96NN9 605 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 CDX2Q99626 313 aaPredicted RBP0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 ASPSCR1Q9BZE9 553 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 PNPLA8Q9NP80 782 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 MKKSQ9NPJ1 570 aaPredicted RBP0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 DNAJB4Q9UDY4 337 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 NFE2L3Q9Y4A8 694 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 CLDN16Q9Y5I7 305 aa0.28□□□□□ -2.36
RNU6-554P-201ENST00000410466 ALG1L2C9J202 215 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 PHF1O43189 567 aaPredicted RBP0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 HNRNPRO43390 633 aaKnown RBP0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 HEXIM1O94992 359 aaKnown RBP0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 NDST3O95803 873 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 RPL17P18621 184 aaKnown RBP0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 CDK11BP21127 795 aaKnown RBP0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 PTPN9P43378 593 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 ZNF133P52736 654 aaPredicted RBP0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 TMEM50BP56557 158 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 GSDMDP57764 484 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 EIF2S3LQ2VIR3 472 aaKnown RBP0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 MOGAT2Q3SYC2 334 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 SYCP2LQ5T4T6 812 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 RNF220Q5VTB9 566 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 FIP1L1Q6UN15 594 aaKnown RBP0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 FRRS1Q6ZNA5 592 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 TMEM170AQ8WVE7 144 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 HMGB4Q8WW32 186 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 SUSD6Q92537 303 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 ZC3HAV1LQ96H79 300 aaKnown RBP0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 ZNF582Q96NG8 517 aaPredicted RBP0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 FUCA2Q9BTY2 467 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 CLPBQ9H078 707 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 LIN7CQ9NUP9 197 aaKnown RBP0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 SLC38A7Q9NVC3 462 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 TEX10Q9NXF1 929 aaPredicted RBP0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 RGL1Q9NZL6 768 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 LZTS1Q9Y250 596 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 RABGAP1Q9Y3P9 1069 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 A3GALT2U3KPV4 340 aa0.27□□□□□ -2.37
RNU6-554P-201ENST00000410466 IGHV4-61A0A0C4DH41 118 aa0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 FAM234BA2RU67 622 aa0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 HSPB2A8KAH6 182 aa0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 SHISA9B4DS77 424 aa0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 E9PSI1 815 aa0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 LRCH4O75427 683 aa0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 IGHV4-59P01825 116 aa0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 THY1P04216 161 aa0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 SELLP14151 372 aa0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 ZNF8P17098 575 aaPredicted RBP0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 DDX5P17844 614 aaKnown RBP0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 FGFR2P21802 821 aa0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 NR2F2P24468 414 aa0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 HSD3B2P26439 372 aa0.26□□□□□ -2.37
RNU6-554P-201ENST00000410466 AVPR2P30518 371 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms