RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 IVLP07476 585 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 ALPPL2P10696 532 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 ZNF140P52738 457 aaPredicted RBP19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 BASP1P80723 227 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 C1orf61Q13536 156 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 TRIP13Q15645 432 aaPredicted RBP19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 DOK6Q6PKX4 331 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 PPP1R21Q6ZMI0 780 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 DNAAF3Q8N9W5 541 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 OR4K2Q8NGD2 314 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 GRK7Q8WTQ7 553 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 GLYATL1Q969I3 302 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 CARS2Q9HA77 564 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 PIH1D1Q9NWS0 290 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 SUFUQ9UMX1 484 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 NEU2Q9Y3R4 380 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 GLYATL1P3A0A0U1RQE8 302 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 SLC25A14O95258 325 aaPredicted RBP19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 LDOC1O95751 146 aaPredicted RBP19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 GAS8O95995 478 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 CASQ1P31415 396 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 GRIA1P42261 906 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 CDK16Q00536 496 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 GPS1Q13098 491 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 PTPRCAPQ14761 206 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 POU6F1Q14863 301 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 ATP13A5Q4VNC0 1218 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 LVRNQ6Q4G3 990 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 FAM151BQ6UXP7 276 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 PTCD2Q8WV60 388 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 CNDP2Q96KP4 475 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 VPS35Q96QK1 796 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 TMEM168Q9H0V1 697 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 CASS4Q9NQ75 786 aa19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 TRNAU1APQ9NX07 287 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 OAS3Q9Y6K5 1087 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-207ENST00000409417 GAPDHSO14556 408 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 YY2O15391 372 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 ANXA6P08133 673 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 CELA2BP08218 269 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 GNPDA1P46926 289 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 CHRNA6Q15825 494 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 KCTD19Q17RG1 926 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 DEFB133Q30KQ1 61 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 PROX2Q3B8N5 592 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 GKN2Q86XP6 184 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 PHYKPLQ8IUZ5 450 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 FAM181AQ8N9Y4 354 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 SCG3Q8WXD2 468 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 TRIM39Q9HCM9 518 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 APPL1Q9UKG1 709 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 COL5A1P20908 1838 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 MROH6A6NGR9 719 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 ASMTLO95671 621 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 ECEL1O95672 775 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 HADHAP40939 763 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 PAFAH1B1P43034 410 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 MAGEA6P43360 314 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 VPS41P49754 854 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 ITGA9Q13797 1035 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 ZCCHC8Q6NZY4 707 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 SYT10Q6XYQ8 523 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 OR13C4Q8NGS5 318 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 DDX47Q9H0S4 455 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 RMI1Q9H9A7 625 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 PCYOX1Q9UHG3 505 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 TMPRSS11EQ9UL52 423 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 DOLKQ9UPQ8 538 aa19.67■□□□□ 0.74
PDLIM2-207ENST00000409417 GPR89AB7ZAQ6 455 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 AP3B1O00203 1094 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 DNAJC6O75061 913 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 PRAMEF1O95521 474 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 GPR89BP0CG08 455 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 CKMT2P17540 419 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 TPSB2P20231 275 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 LAMB3Q13751 1172 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 SEPT6Q14141 434 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 TCEA2Q15560 299 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 TPSAB1Q15661 275 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 PYCR3Q53H96 274 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 CERCAMQ5T4B2 595 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 N4BP2L1Q5TBK1 243 aaPredicted RBP19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 MARK2Q7KZI7 788 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 TAF8Q7Z7C8 310 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 GALNT13Q8IUC8 556 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 GPBAR1Q8TDU6 330 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 SLCO2A1Q92959 643 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 APOLD1Q96LR9 279 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 OR2M4Q96R27 311 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 OR2AG1Q9H205 316 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 SUDS3Q9H7L9 328 aaPredicted RBP19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 TOR4AQ9NXH8 423 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 NCKIPSDQ9NZQ3 722 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 FKBPLQ9UIM3 349 aa19.66■□□□□ 0.74
PDLIM2-207ENST00000409417 LRP4O75096 1905 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 SCN8AQ9UQD0 1980 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 NUAK1O60285 661 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 UGT1A9O60656 530 aa19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 SRP72O76094 671 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-207ENST00000409417 FTH1P19P0C7X4 201 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms