RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 GABRDO14764 452 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 NRP2O60462 931 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 FOXD2O60548 495 aaPredicted RBP13.33□□□□□ -0.28
COL6A2-204ENST00000409416 C1RP00736 705 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 RPL34P49207 117 aaKnown RBP13.33□□□□□ -0.28
COL6A2-204ENST00000409416 MLLT6P55198 1093 aaPredicted RBP13.33□□□□□ -0.28
COL6A2-204ENST00000409416 PLCL1Q15111 1095 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 NR6A1Q15406 480 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 TMTC4Q5T4D3 741 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 LPCAT2Q7L5N7 544 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 DLG3Q92796 817 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 ISL2Q96A47 359 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 TMEM169Q96HH4 297 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 PLEKHG4BQ96PX9 1271 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 POLR1EQ9GZS1 481 aaKnown RBP13.33□□□□□ -0.28
COL6A2-204ENST00000409416 EIF2B4Q9UI10 523 aaKnown RBP13.33□□□□□ -0.28
COL6A2-204ENST00000409416 BLOC1S6Q9UL45 172 aa13.33□□□□□ -0.28
COL6A2-204ENST00000409416 A0A087X1B8 175 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 RBM47A0AV96 593 aaKnown RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 C7orf72A4D263 438 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 AP3B1O00203 1094 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 VILLO15195 856 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 MC4RP32245 332 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 GALK1P51570 392 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 APLP1P51693 650 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 NFYCQ13952 458 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 SQLEQ14534 574 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 MRNIPQ6NTE8 343 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 FUT10Q6P4F1 479 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 MBOAT1Q6ZNC8 495 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 SERINC5Q86VE9 423 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 ANKRD46Q86W74 232 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 CATSPERZQ9NTU4 200 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 UBA2Q9UBT2 640 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 TRMT6Q9UJA5 497 aaKnown RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 USP22Q9UPT9 525 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 TNS1Q9HBL0 1735 aaKnown RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 FBP2O00757 339 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 CCNCP24863 283 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 PCSK6P29122 969 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 ATP5C1P36542 298 aaKnown RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 YAP1P46937 504 aaKnown RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 SCAPQ12770 1279 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 GRB7Q14451 532 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 IMPG1Q17R60 797 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 AAK1Q2M2I8 961 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 DENND5AQ6IQ26 1287 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 POTEHQ6S545 545 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 RBM23Q86U06 439 aaKnown RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 THUMPD3Q9BV44 507 aaKnown RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 UNC93B1Q9H1C4 597 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 MTG2Q9H4K7 406 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 SUN2Q9UH99 717 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 CNOT6Q9ULM6 557 aaKnown RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 MAN1A2O60476 641 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 TACR2P21452 398 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 MZF1P28698 734 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 SGSHP51688 502 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 PRKAA2P54646 552 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 MTA1Q13330 715 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 GRM2Q14416 872 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 CPSF6Q16630 551 aaKnown RBP eCLIP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 RABL3Q5HYI8 236 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 TTC33Q6PID6 262 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 IL27RAQ6UWB1 636 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 SZRD1Q7Z422 152 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 ASB9Q96DX5 294 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 RMND5BQ96G75 393 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 ZFRQ96KR1 1074 aaKnown RBP13.32□□□□□ -0.28
COL6A2-204ENST00000409416 C3orf30Q96M34 536 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 GPR78Q96P69 363 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 FCRL5Q96RD9 977 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 HGH1Q9BTY7 390 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 ALG2Q9H553 416 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 ARMC7Q9H6L4 198 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 CERS4Q9HA82 394 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 IGSF5Q9NSI5 407 aa13.32□□□□□ -0.28
COL6A2-204ENST00000409416 A0A0J9YYE9 177 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 PLOD2O00469 737 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 DENRO43583 198 aaKnown RBP13.31□□□□□ -0.28
COL6A2-204ENST00000409416 NBNO60934 754 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 HMOX2P30519 316 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 ARCN1P48444 511 aaKnown RBP13.31□□□□□ -0.28
COL6A2-204ENST00000409416 AIF1P55008 147 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 CBX2Q14781 532 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-204ENST00000409416 TIGD7Q6NT04 549 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-204ENST00000409416 C17orf99Q6UX52 265 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 C11orf74Q86VG3 221 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 SLC22A15Q8IZD6 547 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 GABPB2Q8TAK5 448 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-204ENST00000409416 METTL6Q8TCB7 284 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 C19orf60Q96EN9 201 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 LINGO1Q96FE5 620 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 FEM1CQ96JP0 617 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 SLC25A23Q9BV35 468 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 NDUFA13Q9P0J0 144 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 CRLS1Q9UJA2 301 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 MICAL3Q7RTP6 2002 aa13.31□□□□□ -0.28
COL6A2-204ENST00000409416 A0A1B0GTL3 188 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms