RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 AP2M1Q96CW1 435 aa16.73■□□□□ 0.27
SSB-202ENST00000409333 NUS1Q96E22 293 aa16.73■□□□□ 0.27
SSB-202ENST00000409333 CCDC97Q96F63 343 aaPredicted RBP16.73■□□□□ 0.27
SSB-202ENST00000409333 CRLS1Q9UJA2 301 aa16.73■□□□□ 0.27
SSB-202ENST00000409333 ZFR2Q9UPR6 939 aaKnown RBP16.73■□□□□ 0.27
SSB-202ENST00000409333 NCKAP1Q9Y2A7 1128 aa16.73■□□□□ 0.27
SSB-202ENST00000409333 RGSL1A5PLK6 1076 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 AGAP14A8MT82 685 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 FADS2P1A8MWK0 482 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 OR1I1O60431 355 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 TM7SF2O76062 418 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 CNTFP26441 200 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 TTPAP49638 278 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 MAGOHP61326 146 aaKnown RBP16.72■□□□□ 0.27
SSB-202ENST00000409333 DBN1Q16643 649 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 AARS2Q5JTZ9 985 aaKnown RBP16.72■□□□□ 0.27
SSB-202ENST00000409333 RBM20Q5T481 1227 aaKnown RBP16.72■□□□□ 0.27
SSB-202ENST00000409333 LGSNQ5TDP6 509 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 TAOK1Q7L7X3 1001 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 SERPINA9Q86WD7 417 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.72■□□□□ 0.27
SSB-202ENST00000409333 RAVER1Q8IY67 606 aaKnown RBP16.72■□□□□ 0.27
SSB-202ENST00000409333 SRRM1Q8IYB3 904 aaKnown RBP16.72■□□□□ 0.27
SSB-202ENST00000409333 DCLK2Q8N568 766 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 LPGAT1Q92604 370 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 NDNQ99608 321 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 RAD18Q9NS91 495 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 INTS10Q9NVR2 710 aaKnown RBP16.72■□□□□ 0.27
SSB-202ENST00000409333 USP36Q9P275 1121 aaKnown RBP16.72■□□□□ 0.27
SSB-202ENST00000409333 TMPRSS11EQ9UL52 423 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 UBA6A0AVT1 1052 aaPredicted RBP16.72■□□□□ 0.27
SSB-202ENST00000409333 FAM47DPA6NHR8 397 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 HMGB1P1B2RPK0 211 aaPredicted RBP16.72■□□□□ 0.27
SSB-202ENST00000409333 CREB1P16220 341 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 ACRV1P26436 265 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 ACSL1P33121 698 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 ITGA9Q13797 1035 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 ZNF284Q2VY69 593 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 GPR33Q49SQ1 333 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 EXOC3L1Q86VI1 746 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 NXPE1Q8N323 547 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 SPEM1Q8N4L4 309 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 TRAM1L1Q8N609 369 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 EDAQ92838 391 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.72■□□□□ 0.27
SSB-202ENST00000409333 MTBPQ96DY7 904 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 SERAC1Q96JX3 654 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 UHRF1Q96T88 793 aaPredicted RBP16.72■□□□□ 0.27
SSB-202ENST00000409333 KLF6Q99612 283 aaPredicted RBP16.72■□□□□ 0.27
SSB-202ENST00000409333 GPR22Q99680 433 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 ZSCAN5AQ9BUG6 496 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 CDH19Q9H159 772 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 STMN4Q9H169 189 aaPredicted RBP16.72■□□□□ 0.27
SSB-202ENST00000409333 CAB39LQ9H9S4 337 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 ITM2CQ9NQX7 267 aa16.72■□□□□ 0.27
SSB-202ENST00000409333 TBC1D3DA0A087WVF3 549 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 TBC1D3IA0A087WXS9 549 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 TBC1D3EA0A087X179 549 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 TBC1D3KA0A087X1G2 549 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 FAM95CA0A1B0GW59 222 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 A0A1W2PQU0 124 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 TBC1D3FA6NER0 549 aaPredicted RBP16.71■□□□□ 0.27
SSB-202ENST00000409333 TBC1D3LB9A6J9 549 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 K7ESM1 405 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 RNGTTO60942 597 aaKnown RBP16.71■□□□□ 0.27
SSB-202ENST00000409333 NDUFS3O75489 264 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 SOD1P00441 154 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 ALDOAP04075 364 aaKnown RBP16.71■□□□□ 0.27
SSB-202ENST00000409333 TBC1D3HP0C7X1 549 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 ATP5DP30049 168 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 PGGT1BP53609 377 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 PPP2CBP62714 309 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 PPP2CAP67775 309 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 SFSWAPQ12872 951 aaKnown RBP16.71■□□□□ 0.27
SSB-202ENST00000409333 FGL2Q14314 439 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 TBC1D3GQ6DHY5 549 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 TBC1D3CQ6IPX1 549 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 KIAA1161Q6NSJ0 714 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 ZNF549Q6P9A3 640 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 ZNF765Q7L2R6 523 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 TBC1D3Q8IZP1 549 aaPredicted RBP16.71■□□□□ 0.27
SSB-202ENST00000409333 GPATCH11Q8N954 259 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 NAT14Q8WUY8 206 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 SCG3Q8WXD2 468 aaKnown RBP16.71■□□□□ 0.27
SSB-202ENST00000409333 KLK6Q92876 244 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 TCF12Q99081 682 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 BOCQ9BWV1 1114 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 TPSD1Q9BZJ3 242 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 CYP8B1Q9UNU6 501 aa16.71■□□□□ 0.27
SSB-202ENST00000409333 GOLGA8RI6L899 631 aa16.7■□□□□ 0.26
SSB-202ENST00000409333 TPP1O14773 563 aa16.7■□□□□ 0.26
SSB-202ENST00000409333 PI15O43692 258 aa16.7■□□□□ 0.26
SSB-202ENST00000409333 OAS2P29728 719 aaKnown RBP16.7■□□□□ 0.26
SSB-202ENST00000409333 PXNP49023 591 aaPredicted RBP16.7■□□□□ 0.26
SSB-202ENST00000409333 RPS21P63220 83 aaKnown RBP16.7■□□□□ 0.26
SSB-202ENST00000409333 TMEM259Q4ZIN3 620 aa16.7■□□□□ 0.26
SSB-202ENST00000409333 SETMARQ53H47 684 aaPredicted RBP16.7■□□□□ 0.26
SSB-202ENST00000409333 RNF187Q5TA31 235 aaPredicted RBP16.7■□□□□ 0.26
SSB-202ENST00000409333 CERS6Q6ZMG9 384 aa16.7■□□□□ 0.26
SSB-202ENST00000409333 CMC1Q7Z7K0 106 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms