RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 AGAP2Q99490 1192 aa16.52■□□□□ 0.24
CHMP3-203ENST00000409225 CNPY3Q9BT09 278 aa16.52■□□□□ 0.24
CHMP3-203ENST00000409225 SLC25A23Q9BV35 468 aa16.52■□□□□ 0.24
CHMP3-203ENST00000409225 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.52■□□□□ 0.24
CHMP3-203ENST00000409225 NOD2Q9HC29 1040 aa16.52■□□□□ 0.24
CHMP3-203ENST00000409225 ANKRD17O75179 2603 aaKnown RBP16.52■□□□□ 0.23
CHMP3-203ENST00000409225 TCP11X1B4DZS4 312 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 GADD45BO75293 160 aaPredicted RBP16.51■□□□□ 0.23
CHMP3-203ENST00000409225 CCNYL3P0C7X3 344 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 INPP5JQ15735 1006 aaPredicted RBP16.51■□□□□ 0.23
CHMP3-203ENST00000409225 CLEC16AQ2KHT3 1053 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 CPZQ66K79 652 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 RFX8Q6ZV50 586 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 USP45Q70EL2 814 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 PHF13Q86YI8 300 aaPredicted RBP16.51■□□□□ 0.23
CHMP3-203ENST00000409225 CT55Q8WUE5 264 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 SCRN2Q96FV2 425 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 TGM7Q96PF1 710 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 MCCC1Q96RQ3 725 aaPredicted RBP16.51■□□□□ 0.23
CHMP3-203ENST00000409225 NUDCD1Q96RS6 583 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 KCTD15Q96SI1 283 aaPredicted RBP16.51■□□□□ 0.23
CHMP3-203ENST00000409225 HERPUD2Q9BSE4 406 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 GANQ9H2C0 597 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 EPB41L1Q9H4G0 881 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 LUZP4Q9P127 313 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 MAP10Q9P2G4 905 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 PCDHGA6Q9Y5G7 932 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 MED13Q9UHV7 2174 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 CELSR2Q9HCU4 2923 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 LRBAP50851 2863 aa16.51■□□□□ 0.23
CHMP3-203ENST00000409225 TCRBV5S1A1TA0A578 114 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 DNAJC6O75061 913 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 PGLSO95336 258 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 C9P02748 559 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 ATP1A1P05023 1023 aaKnown RBP16.5■□□□□ 0.23
CHMP3-203ENST00000409225 ACP5P13686 325 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 SLC2A4P14672 509 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 TYRP1P17643 537 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 TNFRSF8P28908 595 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 SOX5P35711 763 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 GARSP41250 739 aaKnown RBP16.5■□□□□ 0.23
CHMP3-203ENST00000409225 CAMK4Q16566 473 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 ARMC12Q5T9G4 340 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 LRRC66Q68CR7 880 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 MON1BQ7L1V2 547 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 PGBD5Q8N414 524 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 COX14Q96I36 57 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 SMIM14Q96QK8 99 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 ACTL8Q9H568 366 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 SEPT11Q9NVA2 429 aaKnown RBP16.5■□□□□ 0.23
CHMP3-203ENST00000409225 OGFRQ9NZT2 677 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 CPNE7Q9UBL6 633 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 PADI1Q9ULC6 663 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 ABCA12Q86UK0 2595 aa16.5■□□□□ 0.23
CHMP3-203ENST00000409225 CRYBG3Q68DQ2 2970 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 KIR2DS5A0A0G2JLQ3 304 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 A0A0G2JNG1 304 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 LILRA5A6NI73 299 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 KIR2DS3K7RE56 304 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 SPAG6O75602 509 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 RASSF9O75901 435 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 F3P13726 295 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 DESP17661 470 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 LEPRP48357 1165 aaKnown RBP16.49■□□□□ 0.23
CHMP3-203ENST00000409225 KLK7P49862 253 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 CCL11P51671 97 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 POLR2FP61218 127 aaKnown RBP16.49■□□□□ 0.23
CHMP3-203ENST00000409225 MAXP61244 160 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 OGDHQ02218 1023 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 IL11RAQ14626 422 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 KIR2DS5Q14953 304 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 DCUN1D2Q6PH85 259 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 TICAM1Q8IUC6 712 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 SRRM1Q8IYB3 904 aaKnown RBP16.49■□□□□ 0.23
CHMP3-203ENST00000409225 EXD1Q8NHP7 514 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 ZNF599Q96NL3 588 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 RUFY1Q96T51 708 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 SNRNP25Q9BV90 132 aaKnown RBP16.49■□□□□ 0.23
CHMP3-203ENST00000409225 RIOK2Q9BVS4 552 aaKnown RBP16.49■□□□□ 0.23
CHMP3-203ENST00000409225 SLC29A3Q9BZD2 475 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 NLRC4Q9NPP4 1024 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 LHX9Q9NQ69 397 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 PCSK1NQ9UHG2 260 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 HIVEP3Q5T1R4 2406 aa16.49■□□□□ 0.23
CHMP3-203ENST00000409225 ARGFXA6NJG6 315 aa16.48■□□□□ 0.23
CHMP3-203ENST00000409225 RECKO95980 971 aa16.48■□□□□ 0.23
CHMP3-203ENST00000409225 PYGLP06737 847 aa16.48■□□□□ 0.23
CHMP3-203ENST00000409225 HSPA9P38646 679 aaKnown RBP16.48■□□□□ 0.23
CHMP3-203ENST00000409225 RPS18P62269 152 aaKnown RBP16.48■□□□□ 0.23
CHMP3-203ENST00000409225 PTSQ03393 145 aa16.48■□□□□ 0.23
CHMP3-203ENST00000409225 PPP6R3Q5H9R7 873 aaPredicted RBP16.48■□□□□ 0.23
CHMP3-203ENST00000409225 PPP1R15BQ5SWA1 713 aa16.48■□□□□ 0.23
CHMP3-203ENST00000409225 ZNF765Q7L2R6 523 aa16.48■□□□□ 0.23
CHMP3-203ENST00000409225 MLKLQ8NB16 471 aa16.48■□□□□ 0.23
CHMP3-203ENST00000409225 TCTN2Q96GX1 697 aa16.48■□□□□ 0.23
CHMP3-203ENST00000409225 PEBP4Q96S96 227 aa16.48■□□□□ 0.23
CHMP3-203ENST00000409225 MFRPQ9BY79 579 aa16.48■□□□□ 0.23
CHMP3-203ENST00000409225 ZNF768Q9H5H4 540 aaKnown RBP16.48■□□□□ 0.23
CHMP3-203ENST00000409225 ACSS2Q9NR19 701 aa16.48■□□□□ 0.23
CHMP3-203ENST00000409225 VPS18Q9P253 973 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms