RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 RHOBTB1O94844 696 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 EPOP01588 193 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 FCGR1AP12314 374 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 ACVRL1P37023 503 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 FKBP1BP68106 108 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 NFYCQ13952 458 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 LPIN1Q14693 890 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 SLC36A3Q495N2 470 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 SPATA19Q7Z5L4 167 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 GPR141Q7Z602 305 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 SPRED1Q7Z699 444 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 RNF217Q8TC41 542 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 TSPEARQ8WU66 669 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 C8orf48Q96LL4 319 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 RPRD1AQ96P16 312 aaPredicted RBP18.37■□□□□ 0.53
EWSR1-207ENST00000406548 INTS10Q9NVR2 710 aaKnown RBP18.37■□□□□ 0.53
EWSR1-207ENST00000406548 RIMKLBQ9ULI2 386 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 OAZ3Q9UMX2 235 aa18.37■□□□□ 0.53
EWSR1-207ENST00000406548 CROCCQ5TZA2 2017 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 A0A1W2PP18 115 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 UBA6A0AVT1 1052 aaPredicted RBP18.36■□□□□ 0.53
EWSR1-207ENST00000406548 DRGXA6NNA5 263 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 RASAL1O95294 804 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 TBX18O95935 607 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 IGHA2P01877 340 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 RPS17P08708 135 aaKnown RBP18.36■□□□□ 0.53
EWSR1-207ENST00000406548 PRR35P0CG20 571 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 PRSS56P0CW18 603 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 C7P10643 843 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 GRK4P32298 578 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 GSK3BP49841 420 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 APLP1P51693 650 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 EMP3P54852 163 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 KCNK10P57789 538 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 BTG3Q14201 252 aaPredicted RBP18.36■□□□□ 0.53
EWSR1-207ENST00000406548 TRIP4Q15650 581 aaPredicted RBP18.36■□□□□ 0.53
EWSR1-207ENST00000406548 ANKS6Q68DC2 871 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 PAQR3Q6TCH7 311 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 MIB1Q86YT6 1006 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 TRPV3Q8NET8 790 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 ALG2Q9H553 416 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 C8orf4Q9NR00 106 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 GALNT8Q9NY28 637 aa18.36■□□□□ 0.53
EWSR1-207ENST00000406548 PRAMEF11O60813 436 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 ECI2O75521 394 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 MTHFD1P11586 935 aaKnown RBP18.35■□□□□ 0.53
EWSR1-207ENST00000406548 ESRRGP62508 458 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 ECT2LQ008S8 904 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 RCAN2Q14206 197 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 CYP51A1Q16850 503 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 TMTC4Q5T4D3 741 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 SEPT8Q92599 483 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 FUBP3Q96I24 572 aaKnown RBP eCLIP18.35■□□□□ 0.53
EWSR1-207ENST00000406548 PHF12Q96QT6 1004 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 AIG1Q9NVV5 245 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 IKZF3Q9UKT9 509 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 FAM50BQ9Y247 325 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 OAS3Q9Y6K5 1087 aaKnown RBP18.35■□□□□ 0.53
EWSR1-207ENST00000406548 LCHNA4D1U4 455 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 ASPDHA6ND91 283 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 ACOX3O15254 700 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 INPP4BO15327 924 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 B4GALT3O60512 393 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 CYBBP04839 570 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 OR1E1P30953 314 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 MRPL19P49406 292 aaKnown RBP18.35■□□□□ 0.53
EWSR1-207ENST00000406548 FBXO48Q5FWF7 155 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 RABL3Q5HYI8 236 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 PTRH1Q86Y79 214 aaKnown RBP18.35■□□□□ 0.53
EWSR1-207ENST00000406548 TRPV1Q8NER1 839 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 DNAJB14Q8TBM8 379 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 ADAMTS16Q8TE57 1224 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 VPS33AQ96AX1 596 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 CDKN2AIPNLQ96HQ2 116 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 KCTD14Q9BQ13 255 aaPredicted RBP18.35■□□□□ 0.53
EWSR1-207ENST00000406548 NUSAP1Q9BXS6 441 aaKnown RBP18.35■□□□□ 0.53
EWSR1-207ENST00000406548 TAS2R13Q9NYV9 303 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 MED16Q9Y2X0 877 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 TIMM22Q9Y584 194 aa18.35■□□□□ 0.53
EWSR1-207ENST00000406548 A0A0J9YVX5 310 aa18.34■□□□□ 0.53
EWSR1-207ENST00000406548 TCRBV5S2A0A599 114 aa18.34■□□□□ 0.53
EWSR1-207ENST00000406548 TRIM64A6NGJ6 449 aa18.34■□□□□ 0.53
EWSR1-207ENST00000406548 EEDO75530 441 aaKnown RBP18.34■□□□□ 0.53
EWSR1-207ENST00000406548 BAIAP3O94812 1187 aa18.34■□□□□ 0.53
EWSR1-207ENST00000406548 RPLP2P05387 115 aaKnown RBP18.34■□□□□ 0.53
EWSR1-207ENST00000406548 HMBSP08397 361 aa18.34■□□□□ 0.53
EWSR1-207ENST00000406548 FMO4P31512 558 aa18.34■□□□□ 0.53
EWSR1-207ENST00000406548 YBEYP58557 167 aaPredicted RBP18.34■□□□□ 0.53
EWSR1-207ENST00000406548 RAD51Q06609 339 aa18.34■□□□□ 0.53
EWSR1-207ENST00000406548 TSNQ15631 228 aaKnown RBP18.34■□□□□ 0.53
EWSR1-207ENST00000406548 NFE2Q16621 373 aaPredicted RBP18.34■□□□□ 0.53
EWSR1-207ENST00000406548 ZBED5Q49AG3 693 aa18.34■□□□□ 0.53
EWSR1-207ENST00000406548 SETMARQ53H47 684 aaPredicted RBP18.34■□□□□ 0.53
EWSR1-207ENST00000406548 IFNEQ86WN2 208 aa18.34■□□□□ 0.53
EWSR1-207ENST00000406548 CLVS1Q8IUQ0 354 aaPredicted RBP18.34■□□□□ 0.53
EWSR1-207ENST00000406548 EGFL6Q8IUX8 553 aa18.34■□□□□ 0.53
EWSR1-207ENST00000406548 GFM2Q969S9 779 aaKnown RBP18.34■□□□□ 0.53
EWSR1-207ENST00000406548 MUC3BQ9H195 1237 aa18.34■□□□□ 0.53
EWSR1-207ENST00000406548 ZFC3H1O60293 1989 aaKnown RBP18.34■□□□□ 0.53
EWSR1-207ENST00000406548 SYCE1LA8MT33 242 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms