RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 RAVER1Q8IY67 606 aaKnown RBP18.03■□□□□ 0.48
PTPRN2-204ENST00000404321 FAM71DQ8N9W8 422 aa18.03■□□□□ 0.48
PTPRN2-204ENST00000404321 GPR156Q8NFN8 814 aa18.03■□□□□ 0.48
PTPRN2-204ENST00000404321 ZDHHC1Q8WTX9 485 aa18.03■□□□□ 0.48
PTPRN2-204ENST00000404321 DEPDC7Q96QD5 511 aa18.03■□□□□ 0.48
PTPRN2-204ENST00000404321 ZNHIT2Q9UHR6 403 aa18.03■□□□□ 0.48
PTPRN2-204ENST00000404321 AK5Q9Y6K8 562 aa18.03■□□□□ 0.48
PTPRN2-204ENST00000404321 LRP4O75096 1905 aa18.02■□□□□ 0.48
PTPRN2-204ENST00000404321 SRRM3A6NNA2 597 aaPredicted RBP18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 ANXA9O76027 345 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 CCDC175P0C221 793 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 ACTR1BP42025 376 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 GEMP55040 296 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 ACTR1AP61163 376 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 KLF1Q13351 362 aaPredicted RBP18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 SPARCL1Q14515 664 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 C14orf28Q4W4Y0 310 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 ZNF569Q5MCW4 686 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 OGFOD3Q6PK18 319 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 GLT6D1Q7Z4J2 308 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 PROSER1Q86XN7 944 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 TAB3Q8N5C8 712 aaPredicted RBP18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 PATE1Q8WXA2 126 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 ATG4AQ8WYN0 398 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 SCARF2Q96GP6 870 aaPredicted RBP18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 SPATA13Q96N96 652 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 CDH19Q9H159 772 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 RNF215Q9Y6U7 377 aa18.02■□□□□ 0.47
PTPRN2-204ENST00000404321 MTX2O75431 263 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 EPOP01588 193 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 FGF1P05230 155 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 RPLP0P05388 317 aaKnown RBP18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 HLA-DPA1P20036 260 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 GDF10P55107 478 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 DCDC1P59894 354 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 CCL7P80098 99 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 HLTFQ14527 1009 aaKnown RBP eCLIP18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 CHST15Q7LFX5 561 aaPredicted RBP18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 TTC30BQ8N4P2 665 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 TTC13Q8NBP0 860 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 NXPE2Q96DL1 559 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 SRPK1Q96SB4 655 aaKnown RBP18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 OR2AG1Q9H205 316 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 GRPEL1Q9HAV7 217 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 RAXQ9Y2V3 346 aa18.01■□□□□ 0.47
PTPRN2-204ENST00000404321 TRBV23OR9-2A0A075B6M9 112 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 DNAJC6O75061 913 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 USP12O75317 370 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 SLC25A14O95258 325 aaPredicted RBP18■□□□□ 0.47
PTPRN2-204ENST00000404321 ECEL1O95672 775 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 MPOP05164 745 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 ACP5P13686 325 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 PRPSAP1Q14558 356 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 PTPRCAPQ14761 206 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 ISXQ2M1V0 245 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 CERCAMQ5T4B2 595 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 SEL1L2Q5TEA6 688 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 RBM44Q6ZP01 1051 aaKnown RBP18■□□□□ 0.47
PTPRN2-204ENST00000404321 TRAM1L1Q8N609 369 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 GLYATL1Q969I3 302 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 TMEM121Q9BTD3 319 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 ZSCAN5AQ9BUG6 496 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 RAD18Q9NS91 495 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 VPS18Q9P253 973 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 LRIT1Q9P2V4 623 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 ATXN10Q9UBB4 475 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 KCNK6Q9Y257 313 aa18■□□□□ 0.47
PTPRN2-204ENST00000404321 AAR2Q9Y312 384 aaKnown RBP18■□□□□ 0.47
PTPRN2-204ENST00000404321 CACNA1BQ00975 2339 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 GPR39O43194 453 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 GLB1P16278 677 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 ZNF8P17098 575 aaPredicted RBP17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 HMGCLP35914 325 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 SPIDRQ14159 915 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 RPS6KA1Q15418 735 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 MEI1Q5TIA1 1274 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 CRTC3Q6UUV7 619 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 FAM151BQ6UXP7 276 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 ARHGEF18Q6ZSZ5 1173 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 CCNJLQ8IV13 435 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 CACTIN-AS1Q8N1I8 211 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 SLC35B2Q8TB61 432 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 ATXN7L3BQ96GX2 97 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 ALS2CR12Q96Q35 445 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 NRSN2Q9GZP1 204 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 TRABDQ9H4I3 376 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 IL26Q9NPH9 171 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 NFKBIL1Q9UBC1 381 aaPredicted RBP17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 TMPRSS11EQ9UL52 423 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 ARL5AQ9Y689 179 aa17.99■□□□□ 0.47
PTPRN2-204ENST00000404321 KNTC1P50748 2209 aa17.98■□□□□ 0.47
PTPRN2-204ENST00000404321 ASXL3Q9C0F0 2248 aa17.98■□□□□ 0.47
PTPRN2-204ENST00000404321 A0A1W2PQM1 296 aa17.98■□□□□ 0.47
PTPRN2-204ENST00000404321 C5orf60A6NFR6 353 aa17.98■□□□□ 0.47
PTPRN2-204ENST00000404321 AGRPO00253 132 aa17.98■□□□□ 0.47
PTPRN2-204ENST00000404321 METTL18O95568 372 aa17.98■□□□□ 0.47
PTPRN2-204ENST00000404321 EML2O95834 649 aa17.98■□□□□ 0.47
PTPRN2-204ENST00000404321 ADRA1AP35348 466 aa17.98■□□□□ 0.47
PTPRN2-204ENST00000404321 BIRC2Q13490 618 aa17.98■□□□□ 0.47
PTPRN2-204ENST00000404321 PLA2G4EQ3MJ16 856 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms