RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 KIF1CO43896 1103 aaKnown RBP11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CREG1O75629 220 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 KRT38O76015 456 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CPP00450 1065 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 LDLRP01130 860 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 C9P02748 559 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ATP1A1P05023 1023 aaKnown RBP11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ANKRD34CP0C6C1 535 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ERCC2P18074 760 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 GPR1P46091 355 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 LEPRP48357 1165 aaKnown RBP11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 JAM2P57087 298 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TPI1P60174 286 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MAXP61244 160 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 AP1S1P61966 158 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 RPS18P62269 152 aaKnown RBP11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 UBE2IP63279 158 aaKnown RBP11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CLEC16AQ2KHT3 1053 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MAMDC2Q7Z304 686 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PHF13Q86YI8 300 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 C3orf20Q8ND61 904 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CT55Q8WUE5 264 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PDCD6IPQ8WUM4 868 aaKnown RBP11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SCRN2Q96FV2 425 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 C9orf72Q96LT7 481 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 MCEEQ96PE7 176 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TUBGCP2Q9BSJ2 902 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 SELENOOQ9BVL4 669 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 TWSG1Q9GZX9 223 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ZMYND15Q9H091 742 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 ETNK2Q9NVF9 386 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 CUEDC1Q9NWM3 386 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 KCND3Q9UK17 655 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 KCNK6Q9Y257 313 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PPIL1Q9Y3C6 166 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PCDHGA6Q9Y5G7 932 aa11.78□□□□□ -0.52
SPTLC1P3-201ENST00000403408 PIPSLA2A3N6 862 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 GOLGA6L3A6NEY3 463 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 INPP4BO15327 924 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PRKCSHP14314 528 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 TNFRSF8P28908 595 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PPM1FP49593 454 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SEPHS1P49903 392 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 COPB1P53618 953 aaKnown RBP11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 FOXM1Q08050 763 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 IL10RBQ08334 325 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 DNASE1L3Q13609 305 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 IL10RAQ13651 578 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 LBRQ14739 615 aaKnown RBP11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 INPP5JQ15735 1006 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 C1QL3Q5VWW1 255 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ZNF677Q86XU0 584 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SRRM1Q8IYB3 904 aaKnown RBP11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 EFCAB3Q8N7B9 438 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 C19orf60Q96EN9 201 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 OR6C1Q96RD1 312 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PHTF1Q9UMS5 762 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 AP4E1Q9UPM8 1137 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PCDHB3Q9Y5E6 796 aa11.77□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PSMD11O00231 422 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 EEF2KO00418 725 aaKnown RBP11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 FZD6O60353 706 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SOCS5O75159 536 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SPAG6O75602 509 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 NDUFA10O95299 355 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PGLSO95336 258 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PRF1P14222 555 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 TYRP1P17643 537 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 EPHA4P54764 986 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PPP1CAP62136 330 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 DPYSQ14117 519 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 RFTN1Q14699 578 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CAMK4Q16566 473 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PAPD7Q5XG87 772 aaKnown RBP11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 LRRC66Q68CR7 880 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 FAM199XQ6PEV8 388 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 RFX8Q6ZV50 586 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CHST15Q7LFX5 561 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 GALNT13Q8IUC8 556 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PAF1Q8N7H5 531 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 AP2M1Q96CW1 435 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PLEKHG4BQ96PX9 1271 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 NUDCD1Q96RS6 583 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 MGME1Q9BQP7 344 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CNPY3Q9BT09 278 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 RIOK2Q9BVS4 552 aaKnown RBP11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 TRIM7Q9C029 511 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ACTL8Q9H568 366 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ZNF768Q9H5H4 540 aaKnown RBP11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 DHX35Q9H5Z1 703 aaKnown RBP11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SP110Q9HB58 689 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 IGSF5Q9NSI5 407 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 SAMSN1Q9NSI8 373 aaKnown RBP11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 CPNE7Q9UBL6 633 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 ZNHIT2Q9UHR6 403 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 METRNQ9UJH8 293 aa11.76□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PIKFYVEQ9Y2I7 2098 aa11.75□□□□□ -0.53
SPTLC1P3-201ENST00000403408 PKDREJQ9NTG1 2253 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms