RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SLC52A3Q9NQ40 469 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 MIOSQ9NXC5 875 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 OAZ3Q9UMX2 235 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 PCDHA9Q9Y5H5 950 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 TET1Q8NFU7 2136 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 FAM149AA5PLN7 773 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 IMPDH2P12268 514 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 OXTRP30559 389 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 RENBPP51606 427 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 ARSDP51689 593 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 GRB7Q14451 532 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 RBM12BQ8IXT5 1001 aaKnown RBP19.74■□□□□ 0.75
CCDC47-202ENST00000403162 PTGR2Q8N8N7 351 aaPredicted RBP19.74■□□□□ 0.75
CCDC47-202ENST00000403162 TSPEARQ8WU66 669 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 HDAC10Q969S8 669 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 TRIM54Q9BYV2 358 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 NOL6Q9H6R4 1146 aaKnown RBP19.74■□□□□ 0.75
CCDC47-202ENST00000403162 MID1IP1Q9NPA3 183 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 MARCH4Q9P2E8 410 aaPredicted RBP19.74■□□□□ 0.75
CCDC47-202ENST00000403162 PTPRDP23468 1912 aa19.74■□□□□ 0.75
CCDC47-202ENST00000403162 MSI1O43347 362 aaKnown RBP19.73■□□□□ 0.75
CCDC47-202ENST00000403162 ODC1P11926 461 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 HOXB8P17481 243 aaPredicted RBP19.73■□□□□ 0.75
CCDC47-202ENST00000403162 LBPP18428 481 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 RPL9P32969 192 aaKnown RBP19.73■□□□□ 0.75
CCDC47-202ENST00000403162 RFC2P35250 354 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 CD86P42081 329 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 ENTPD1P49961 510 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 SCNN1BP51168 640 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 CAPRIN1Q14444 709 aaKnown RBP19.73■□□□□ 0.75
CCDC47-202ENST00000403162 TIGD5Q53EQ6 642 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 DUS1LQ6P1R4 473 aaKnown RBP19.73■□□□□ 0.75
CCDC47-202ENST00000403162 BLOC1S3Q6QNY0 202 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 RAB44Q7Z6P3 723 aaPredicted RBP19.73■□□□□ 0.75
CCDC47-202ENST00000403162 LDB1Q86U70 411 aaPredicted RBP19.73■□□□□ 0.75
CCDC47-202ENST00000403162 TERB1Q8NA31 727 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 OR52K2Q8NGK3 314 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 SCAMP5Q8TAC9 235 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 SH3RF2Q8TEC5 729 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 CASP10Q92851 521 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 PKMYT1Q99640 499 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 NT5MQ9NPB1 228 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 MPP6Q9NZW5 540 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 PCDH10Q9P2E7 1040 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 PTGDR2Q9Y5Y4 395 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 MMP2P08253 660 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 ABRAXAS1Q6UWZ7 409 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 Q6ZNX1 250 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 LYSMD3Q7Z3D4 306 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 ZNF554Q86TJ5 538 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 PTRH1Q86Y79 214 aaKnown RBP19.73■□□□□ 0.75
CCDC47-202ENST00000403162 RHEBL1Q8TAI7 183 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 MUC3BQ9H195 1237 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 CXorf21Q9HAI6 301 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 FAIMQ9NVQ4 179 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 GIMAP2Q9UG22 337 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 DSEQ9UL01 958 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 CDC14AQ9UNH5 594 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 HS3ST4Q9Y661 456 aa19.73■□□□□ 0.75
CCDC47-202ENST00000403162 CLOCKO15516 846 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 TPST1O60507 370 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 VPS4BO75351 444 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 POMCP01189 267 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 IDO1P14902 403 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 DCKP27707 260 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 SUOXP51687 545 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 FOXA1P55317 472 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 GLB1LQ6UWU2 654 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 C14orf80Q86SX3 495 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 PATL1Q86TB9 770 aaKnown RBP19.72■□□□□ 0.75
CCDC47-202ENST00000403162 DCP1BQ8IZD4 617 aaKnown RBP19.72■□□□□ 0.75
CCDC47-202ENST00000403162 PAPD5Q8NDF8 572 aaKnown RBP19.72■□□□□ 0.75
CCDC47-202ENST00000403162 TMEM125Q96AQ2 219 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 TUBB1Q9H4B7 451 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 POPDC3Q9HBV1 291 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 TMLHEQ9NVH6 421 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 TMEM161AQ9NX61 479 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 PCDHB7Q9Y5E2 793 aa19.72■□□□□ 0.75
CCDC47-202ENST00000403162 TCRBV5S2A0A599 114 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 PPP6CO00743 305 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 MAGEB3O15480 346 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 SNAP91O60641 907 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 CSF2RAP15509 400 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 CAPGP40121 348 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 MRPL19P49406 292 aaKnown RBP19.71■□□□□ 0.75
CCDC47-202ENST00000403162 TIAL1Q01085 375 aaKnown RBP eCLIP19.71■□□□□ 0.75
CCDC47-202ENST00000403162 UPP1Q16831 310 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 GEN1Q17RS7 908 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 CNKSR3Q6P9H4 555 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 ELMSAN1Q6PJG2 1045 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 FAM43BQ6ZT52 329 aaPredicted RBP19.71■□□□□ 0.75
CCDC47-202ENST00000403162 DDIASQ8IXT1 998 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 UMODL1-AS1Q8N2C9 162 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 SMYD1Q8NB12 490 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 CYGBQ8WWM9 190 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 EXT2Q93063 718 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 YTHDF1Q9BYJ9 559 aaKnown RBP19.71■□□□□ 0.75
CCDC47-202ENST00000403162 POLG2Q9UHN1 485 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 LRFN2Q9ULH4 789 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 ZNF510Q9Y2H8 683 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms