RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 S100A14Q9HCY8 104 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 TRMT13Q9NUP7 481 aaKnown RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 CDH22Q9UJ99 828 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 LDLRAP1Q5SW96 308 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 TRMT10BQ6PF06 316 aaKnown RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 PTCHD4Q6ZW05 846 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 NANOGNBQ7Z5D8 188 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 DENND6AQ8IWF6 608 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 ZNF781Q8N8C0 355 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 TWIST2Q8WVJ9 160 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 CLP1Q92989 425 aaKnown RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 FEM1CQ96JP0 617 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 DEFB118Q96PH6 123 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 CLEC4AQ9UMR7 237 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 GNEQ9Y223 722 aaKnown RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 MYBPHLA2RUH7 354 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 C5orf60A6NFR6 353 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 SCAMP1O15126 338 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 RPP40O75818 363 aaKnown RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 FADS2O95864 444 aaKnown RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 LMO2P25791 158 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 NMBRP28336 390 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 GNPDA1P46926 289 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 ITGA7Q13683 1181 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 CPTPQ5TA50 214 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 IL23RQ5VWK5 629 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 PLPP4Q5VZY2 271 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 AAGABQ6PD74 315 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 BHLHB9Q6PI77 547 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 FOXR2Q6PJQ5 311 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 ANKRD46Q86W74 232 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 RAVER1Q8IY67 606 aaKnown RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 SIX5Q8N196 739 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 TRMOQ9BU70 441 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 KIAA1210Q9ULL0 1709 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 TBC1D3DA0A087WVF3 549 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TBC1D3IA0A087WXS9 549 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TBC1D3EA0A087X179 549 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TBC1D3KA0A087X1G2 549 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TBC1D3FA6NER0 549 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TBC1D3LB9A6J9 549 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 ZW10O43264 779 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 PLOD3O60568 738 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TBC1D3HP0C7X1 549 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 COL6A1P12109 1028 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TPSB2P20231 275 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 SEMG2Q02383 582 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TPSAB1Q15661 275 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 PITRM1Q5JRX3 1037 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TBC1D3GQ6DHY5 549 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TBC1D3CQ6IPX1 549 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 FSTL4Q6MZW2 842 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TBC1D3Q8IZP1 549 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-208ENST00000399349 PIH1D2Q8WWB5 315 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 SPATA5L1Q9BVQ7 753 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 IPPKQ9H8X2 491 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 GON4LQ3T8J9 2241 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 GLYATL1P3A0A0U1RQE8 302 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 ENPP3O14638 875 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 ADAMTS3O15072 1205 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 SERPINB7O75635 380 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TM7SF2O76062 418 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 C9orf64Q5T6V5 341 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 SPPL2BQ8TCT7 592 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 PCED1BQ96HM7 432 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 AGAP2Q99490 1192 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 CHID1Q9BWS9 393 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 DGKBQ9Y6T7 804 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TRAFD1O14545 582 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-208ENST00000399349 CLDN11O75508 207 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 OR5F1O95221 314 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 YAP1P46937 504 aaKnown RBP13.11□□□□□ -0.31
ITSN1-208ENST00000399349 NAE1Q13564 534 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 RALGPS1Q5JS13 557 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 POMZP3Q6PJE2 187 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 ADGRD1Q6QNK2 874 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 LBX2Q6XYB7 198 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 RERGQ96A58 199 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-208ENST00000399349 ART5Q96L15 291 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 Q96MT0 163 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 GATA5Q9BWX5 397 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-208ENST00000399349 IGLV3-22A0A075B6J6 115 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 SMIM35A0A1B0GVV1 85 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 C9IYK1 514 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 TSPAN1O60635 241 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 MSCO60682 206 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 AP2A1O95782 977 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 F7P08709 466 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-208ENST00000399349 HOXC6P09630 235 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 KIR3DL1P43629 444 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 CDK9P50750 372 aaKnown RBP13.11□□□□□ -0.31
ITSN1-208ENST00000399349 JAM2P57087 298 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 GJA9P57773 515 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 SRSF11Q05519 484 aaKnown RBP13.11□□□□□ -0.31
ITSN1-208ENST00000399349 SLC26A9Q7LBE3 791 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 C12orf50Q8NA57 414 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-208ENST00000399349 KBTBD8Q8NFY9 601 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 CLEC4CQ8WTT0 213 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 DHX33Q9H6R0 707 aaKnown RBP13.11□□□□□ -0.31
ITSN1-208ENST00000399349 LRTM1Q9HBL6 345 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms