RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 CCNI2Q6ZMN8 369 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 EFL1Q7Z2Z2 1120 aaKnown RBP13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SDR16C5Q8N3Y7 309 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GPBAR1Q8TDU6 330 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GATA6Q92908 595 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SCARF2Q96GP6 870 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ZSCAN5AQ9BUG6 496 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TMEM121BQ9BXQ6 578 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 DPEP2Q9H4A9 486 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 IL26Q9NPH9 171 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SPATS2LQ9NUQ6 558 aaKnown RBP13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TRNAU1APQ9NX07 287 aaKnown RBP13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 IL17CQ9P0M4 197 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PADI4Q9UM07 663 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ZNF148Q9UQR1 794 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GPSM3Q9Y4H4 160 aa13.98□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PLXNB3Q9ULL4 1909 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 B4DGG1 531 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GPR39O43194 453 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 DNAJC6O75061 913 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ZNF189O75820 626 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SLC25A14O95258 325 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 IVLP07476 585 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ETS1P14921 441 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 STIP1P31948 543 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 INSM1Q01101 510 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 MSLNQ13421 630 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PYCR3Q53H96 274 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 KCTD11Q693B1 232 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SLC30A9Q6PML9 568 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 KLHDC8BQ8IXV7 354 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GALNT15Q8N3T1 639 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TRAM1L1Q8N609 369 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PDCD7Q8N8D1 485 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ARL10Q8N8L6 244 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GLIS1Q8NBF1 620 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GLMNQ92990 594 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 RTP4Q96DX8 246 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TBL1YQ9BQ87 522 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 CDH19Q9H159 772 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 RAD18Q9NS91 495 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PIH1D1Q9NWS0 290 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 NCKIPSDQ9NZQ3 722 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 HACD3Q9P035 362 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 NFKBIL1Q9UBC1 381 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ZNHIT2Q9UHR6 403 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TMPRSS11EQ9UL52 423 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 KCTD3Q9Y597 815 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 KNTC1P50748 2209 aa13.97□□□□□ -0.17
HLA-DQB1-202ENST00000399079 USP27XA6NNY8 438 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ZSCAN12O43309 604 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 OPA1O60313 960 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 MTX2O75431 263 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 CDK4P11802 303 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 JUPP14923 745 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 RPIAP49247 311 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ILF3Q12906 894 aaKnown RBP eCLIP13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ATP13A5Q4VNC0 1218 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 KHDC1Q4VXA5 237 aaKnown RBP13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ZNF569Q5MCW4 686 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 FAM151BQ6UXP7 276 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 UNQ6494/PRO21346Q6UXR6 183 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TMPRSS12Q86WS5 348 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 SLC35F6Q8N357 371 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GPR156Q8NFN8 814 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GLYATL1Q969I3 302 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PLEKHG4BQ96PX9 1271 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 OR2M4Q96R27 311 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GSDMCQ9BYG8 508 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 FRMD8P1Q9BZ68 369 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ABCG4Q9H172 646 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 OR2AG1Q9H205 316 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 TAAR2Q9P1P5 351 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 VPS18Q9P253 973 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 ATXN10Q9UBB4 475 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 RABGEF1Q9UJ41 708 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 PKP3Q9Y446 797 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 JRKLQ9Y4A0 524 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 DMXL2Q8TDJ6 3036 aa13.96□□□□□ -0.17
HLA-DQB1-202ENST00000399079 GAPDHSO14556 408 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 NOBOXO60393 691 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 UGT1A9O60656 530 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 GP1BAP07359 652 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ZNF8P17098 575 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 TPH1P17752 444 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 UGT1A6P19224 532 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 UGT1A1P22309 533 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 UGT1A4P22310 534 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CA5AP35218 305 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 UGT1A3P35503 534 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 UGT1A5P35504 534 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 E2F1Q01094 437 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 TARDBPQ13148 414 aaKnown RBP eCLIP13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CHRNA6Q15825 494 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CCNG2Q16589 344 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 LONRF2Q1L5Z9 754 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 P3H1Q32P28 736 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 OGFOD3Q6PK18 319 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CHST15Q7LFX5 561 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 GALNT13Q8IUC8 556 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms