RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 ABRQ12979 859 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 REP15Q6BDI9 236 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 OGFOD2Q6N063 350 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 DCLRE1AQ6PJP8 1040 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 AFTPHQ6ULP2 937 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 CRTC3Q6UUV7 619 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 CTU1Q7Z7A3 348 aaKnown RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 ADAMTSL2Q86TH1 951 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 SLCO6A1Q86UG4 719 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 ANKRD46Q86W74 232 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 RASAL3Q86YV0 1011 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 NAT16Q8N8M0 369 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 SEPT8Q92599 483 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 PCED1BQ96HM7 432 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 BTBD9Q96Q07 612 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 ZDHHC6Q9H6R6 413 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 LIN28AQ9H9Z2 209 aaKnown RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 TRIM39Q9HCM9 518 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 PSAT1Q9Y617 370 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 KRT87PA6NCN2 255 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 C9IYK1 514 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 SIX3O95343 332 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 IGSF6O95976 241 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 OTCP00480 354 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 GMPRP36959 345 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 MTHFRP42898 656 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 YAP1P46937 504 aaKnown RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 GJA9P57773 515 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 TAF10Q12962 218 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 ACOX1Q15067 660 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 LINGO4Q6UY18 593 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 TAC4Q86UU9 113 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 CD101Q93033 1021 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 CAPNS2Q96L46 248 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 DEPDC7Q96QD5 511 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 CCDC28BQ9BUN5 200 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 RAB26Q9ULW5 256 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 ADAMTS5Q9UNA0 930 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 ITM2BQ9Y287 266 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 TEX264Q9Y6I9 313 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 TMEM88BA6NKF7 163 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 PIP5K1BO14986 540 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 PCDH8O95206 1070 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 EPORP19235 508 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 GGT5P36269 586 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 RPS9P46781 194 aaKnown RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 PGGT1BP53609 377 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 RAB14P61106 215 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 ATP6V0D1P61421 351 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 ADGRE1Q14246 886 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 MED22Q15528 200 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 NADK2Q4G0N4 442 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 KLHL17Q6TDP4 642 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 CDHR3Q6ZTQ4 885 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 NUDT18Q6ZVK8 323 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 RD3Q7Z3Z2 195 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 TOP6BLQ8N6T0 577 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 CANT1Q8WVQ1 401 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 PROX1Q92786 737 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 HPS1Q92902 700 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 OMA1Q96E52 524 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 CYP2S1Q96SQ9 504 aa10.72□□□□□ -0.69
CCDC40-204ENST00000397545 RCOR3Q9P2K3 495 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-204ENST00000397545 TTC24A2A3L6 582 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 MANSC4A6NHS7 340 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 FADS2O95864 444 aaKnown RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 CATP04040 527 aaKnown RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 FGF1P05230 155 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 FESP07332 822 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 COL6A2P12110 1019 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 PKMP14618 531 aaKnown RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 MYL12AP19105 171 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 HDCP19113 662 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 ITGAXP20702 1163 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 CLCNKBP51801 687 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 DUSP4Q13115 394 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 TSNQ15631 228 aaKnown RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 HECTD3Q5T447 861 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 FGD2Q7Z6J4 655 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 OR9I1Q8NGQ6 314 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 PRR11Q96HE9 360 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 YME1L1Q96TA2 773 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 C2orf49Q9BVC5 232 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 TXNRD2Q9NNW7 524 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 SMPD3Q9NY59 655 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 MFHAS1Q9Y4C4 1052 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 ANKDD1BA6NHY2 528 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 IFRD1O00458 451 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 AOC2O75106 756 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 TSPAN19P0C672 248 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 MTHFD1P11586 935 aaKnown RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 SERPINA4P29622 427 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 MRPS6P82932 125 aaKnown RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 SMAD3P84022 425 aaKnown RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 TARBP2Q15633 366 aaKnown RBP10.71□□□□□ -0.69
CCDC40-204ENST00000397545 NOMO2Q5JPE7 1267 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 GPR142Q7Z601 462 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 MON1AQ86VX9 555 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 KRT78Q8N1N4 520 aa10.71□□□□□ -0.69
CCDC40-204ENST00000397545 MCFD2Q8NI22 146 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms