RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 KPNA3O00505 521 aaPredicted RBP13.21□□□□□ -0.29
SEC13-209ENST00000397117 BCAT2O15382 392 aaPredicted RBP13.21□□□□□ -0.29
SEC13-209ENST00000397117 LDB2O43679 373 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 SLC4A1P02730 911 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 CTSLP07711 333 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 ALPIP09923 528 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 XPAP23025 273 aaPredicted RBP13.21□□□□□ -0.29
SEC13-209ENST00000397117 OXTRP30559 389 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 MSH2P43246 934 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 MGAT5Q09328 741 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 CNGA3Q16281 694 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 HLA-BQ31612 363 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 ZNF805Q5CZA5 627 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 PDPK2PQ6A1A2 396 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 ESRP1Q6NXG1 681 aaKnown RBP13.21□□□□□ -0.29
SEC13-209ENST00000397117 ZNF449Q6P9G9 518 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 LRRC6Q86X45 466 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 TMPRSS6Q8IU80 811 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 PPM1NQ8N819 430 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 TMIEQ8NEW7 156 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 HCAR2Q8TDS4 363 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 PEX13Q92968 403 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 PPP1R16AQ96I34 528 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 GPR63Q9BZJ6 419 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 MIR1-1HGQ9H1L0 117 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 MED4Q9NPJ6 270 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 TM7SF3Q9NS93 570 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 TREX1Q9NSU2 369 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 ZFATQ9P243 1243 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 VPS18Q9P253 973 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 FETUBQ9UGM5 382 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 SLC2A6Q9UGQ3 507 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 SLC24A2Q9UI40 661 aa13.21□□□□□ -0.29
SEC13-209ENST00000397117 FNDC3AQ9Y2H6 1198 aaKnown RBP13.21□□□□□ -0.29
SEC13-209ENST00000397117 CAPN8A6NHC0 703 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 FAM159BA6NKW6 160 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 RGS16O15492 202 aaPredicted RBP13.21□□□□□ -0.3
SEC13-209ENST00000397117 RNASEH1O60930 286 aaKnown RBP13.21□□□□□ -0.3
SEC13-209ENST00000397117 CDH16O75309 829 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 VAPBO95292 243 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 CER1O95813 267 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 IL1BP01584 269 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 INHBAP08476 426 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 ERVK-10P10266 1014 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 LPOP22079 712 aaPredicted RBP13.21□□□□□ -0.3
SEC13-209ENST00000397117 HNF1BP35680 557 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 COPAP53621 1224 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 PRAMEP78395 509 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 THOC5Q13769 683 aaKnown RBP13.21□□□□□ -0.3
SEC13-209ENST00000397117 EFTUD2Q15029 972 aaKnown RBP eCLIP13.21□□□□□ -0.39e-9■■■■□ 23.5
SEC13-209ENST00000397117 KIAA0930Q6ICG6 404 aaPredicted RBP13.21□□□□□ -0.3
SEC13-209ENST00000397117 IL27RAQ6UWB1 636 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 KCNMB4Q86W47 210 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 ZSWIM9Q86XI8 627 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 UNC5BQ8IZJ1 945 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 GABPB2Q8TAK5 448 aaPredicted RBP13.21□□□□□ -0.3
SEC13-209ENST00000397117 PIP4K2CQ8TBX8 421 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 STYXQ8WUJ0 223 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 SPOCK2Q92563 424 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 VOPP1Q96AW1 172 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 SIPA1Q96FS4 1042 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 SCRN2Q96FV2 425 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 BBC3Q96PG8 261 aaPredicted RBP13.21□□□□□ -0.3
SEC13-209ENST00000397117 SMIM14Q96QK8 99 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 PAFAH2Q99487 392 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 SH3GL2Q99962 352 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 HELZ2Q9BYK8 2649 aaKnown RBP13.21□□□□□ -0.3
SEC13-209ENST00000397117 STMN4Q9H169 189 aaPredicted RBP13.21□□□□□ -0.3
SEC13-209ENST00000397117 PRSS16Q9NQE7 514 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 DYRK4Q9NR20 520 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 IL1RAPL1Q9NZN1 696 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 TXNDC16Q9P2K2 825 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 DKK3Q9UBP4 350 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 RIMKLBQ9ULI2 386 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 PPM1HQ9ULR3 514 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 PKP3Q9Y446 797 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 ZNF711Q9Y462 761 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 KCTD3Q9Y597 815 aa13.21□□□□□ -0.3
SEC13-209ENST00000397117 C1orf232A0A0U1RR37 186 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 C16orf96A6NNT2 1141 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 C1QTNF3-AMACRE9PGA6 284 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 STX7O15400 261 aaKnown RBP13.2□□□□□ -0.3
SEC13-209ENST00000397117 BUD23O43709 281 aaKnown RBP13.2□□□□□ -0.3
SEC13-209ENST00000397117 PIAS1O75925 651 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 TMPRSS15P98073 1019 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 NAB1Q13506 487 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 SMAD1Q15797 465 aaKnown RBP13.2□□□□□ -0.3
SEC13-209ENST00000397117 UGP2Q16851 508 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 POM121L1PQ3SYA9 428 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 HSP90AA5PQ58FG0 334 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 FAM46CQ5VWP2 391 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 TTC7BQ86TV6 843 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 KRT222Q8N1A0 295 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 RIBC1Q8N443 379 aaPredicted RBP13.2□□□□□ -0.3
SEC13-209ENST00000397117 OR6P1Q8NGX9 317 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 DNAJC1Q96KC8 554 aaKnown RBP13.2□□□□□ -0.3
SEC13-209ENST00000397117 FAM129BQ96TA1 746 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 CDC6Q99741 560 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 PCED1AQ9H1Q7 454 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 ZFYVE1Q9HBF4 777 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms