RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TAF8Q7Z7C8 310 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 GKN2Q86XP6 184 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 PGBD5Q8N414 524 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 LZTR1Q8N653 840 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 EXD3Q8N9H8 876 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 WDR48Q8TAF3 677 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 ACTL9Q8TC94 416 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 SCG3Q8WXD2 468 aaKnown RBP10.32□□□□□ -0.76
NEDD8-202ENST00000396828 WBP1Q96G27 269 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 SMIM14Q96QK8 99 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 TUBGCP5Q96RT8 1024 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 FERMT1Q9BQL6 677 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 DDX47Q9H0S4 455 aaKnown RBP10.32□□□□□ -0.76
NEDD8-202ENST00000396828 ATP13A3Q9H7F0 1226 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 SPATS2LQ9NUQ6 558 aaKnown RBP10.32□□□□□ -0.76
NEDD8-202ENST00000396828 ETNK2Q9NVF9 386 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 WDR70Q9NW82 654 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 ZNF148Q9UQR1 794 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 PCDHGC4Q9Y5F7 938 aa10.32□□□□□ -0.76
NEDD8-202ENST00000396828 TLN1Q9Y490 2541 aaKnown RBP10.32□□□□□ -0.76
NEDD8-202ENST00000396828 ARHGAP42A6NI28 874 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 B4DGG1 531 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 H7C0C1 242 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 B4GAT1O43505 415 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 ECEL1O95672 775 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 GAS8O95995 478 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 ELFN1P0C7U0 828 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 PECAM1P16284 738 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 WT1P19544 449 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 MX2P20592 715 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 SERPINA4P29622 427 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 CCKBRP32239 447 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 ATP5OP48047 213 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 POLD2P49005 469 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 SCNN1BP51168 640 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 KIAA1024LP59773 190 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 B4GALNT1Q00973 533 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 ZFP36L1Q07352 338 aaKnown RBP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 BCL2L1Q07817 233 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 XRCC4Q13426 336 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 HLTFQ14527 1009 aaKnown RBP eCLIP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 GRM3Q14832 879 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 ACOX1Q15067 660 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 PDK1Q15118 436 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 CNGA3Q16281 694 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 LINC00303Q3SY05 128 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 PNCKQ6P2M8 343 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 RFLNAQ6ZTI6 216 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 SYDE1Q6ZW31 735 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 DPPA4Q7L190 304 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 GSTA5Q7RTV2 222 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 SPRED1Q7Z699 444 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 ZC3H18Q86VM9 953 aaKnown RBP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 NRROSQ86YC3 692 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 JAMLQ86YT9 394 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 CCNJLQ8IV13 435 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 NOA1Q8NC60 698 aaKnown RBP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 MYRIPQ8NFW9 859 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 OR56A4Q8NGH8 313 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 ATL2Q8NHH9 583 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 PATE1Q8WXA2 126 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 ATG4AQ8WYN0 398 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 CCNL2Q96S94 520 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 CINPQ9BW66 212 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 BRD8Q9H0E9 1235 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 SEMA6CQ9H3T2 930 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 SUDS3Q9H7L9 328 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 SP110Q9HB58 689 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 RDH14Q9HBH5 336 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 CYP4F12Q9HCS2 524 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 FOXJ2Q9P0K8 574 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 LRIT1Q9P2V4 623 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 SAE1Q9UBE0 346 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 B4GALT6Q9UBX8 382 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 PISDQ9UG56 409 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 PCYOX1Q9UHG3 505 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 AMACRQ9UHK6 382 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 MOSPD1Q9UJG1 213 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 APPL1Q9UKG1 709 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 DRG1Q9Y295 367 aaKnown RBP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 R3HDM2Q9Y2K5 976 aaKnown RBP10.31□□□□□ -0.76
NEDD8-202ENST00000396828 PLEKHM1Q9Y4G2 1056 aa10.31□□□□□ -0.76
NEDD8-202ENST00000396828 MAST4O15021 2626 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 PRAMEF33A0A0G2JMD5 474 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 CFAP69A5D8W1 941 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 FAM187AA6NFU0 413 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 HACD1B0YJ81 288 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 B8ZZF3 427 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 C9orf172C9J069 976 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 J3QKU1 62 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 CACNB4O00305 520 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-202ENST00000396828 PPP1R12AO14974 1030 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-202ENST00000396828 MFSD11O43934 449 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 PRAMEF10O60809 474 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 CEACAM5P06731 702 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 RHOXF2BP0C7M4 288 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 RBP3P10745 1247 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 GLB1P16278 677 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 CR2P20023 1033 aa10.3□□□□□ -0.76
NEDD8-202ENST00000396828 LHCGRP22888 699 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms