RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.66□□□□□ -1.02
BDNF-204ENST00000395980 RNF34Q969K3 372 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 BIRC7Q96CA5 298 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 FBXL8Q96CD0 374 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 CHID1Q9BWS9 393 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 ING2Q9H160 280 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 TUBB1Q9H4B7 451 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 SPON1Q9HCB6 807 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 CSNK1G1Q9HCP0 422 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 TLR9Q9NR96 1032 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 RGS18Q9NS28 235 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 TRNAU1APQ9NX07 287 aaKnown RBP8.66□□□□□ -1.02
BDNF-204ENST00000395980 ZIM2Q9NZV7 527 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 DSEQ9UL01 958 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 CDH9Q9ULB4 789 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 PCDHB3Q9Y5E6 796 aa8.66□□□□□ -1.02
BDNF-204ENST00000395980 MIA3Q5JRA6 1907 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 CLDN25C9JDP6 229 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 CYBBP04839 570 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 ALOX5P09917 674 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 TSPAN8P19075 237 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 CHRM3P20309 590 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 EEF1B2P24534 225 aaKnown RBP8.65□□□□□ -1.02
BDNF-204ENST00000395980 CDH13P55290 713 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 NRG1Q02297 640 aaPredicted RBP8.65□□□□□ -1.02
BDNF-204ENST00000395980 GEN1Q17RS7 908 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 TRIM16LQ309B1 348 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 UBXN11Q5T124 520 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 PARP8Q8N3A8 854 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 AADATQ8N5Z0 425 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 EDEM1Q92611 657 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 IMP4Q96G21 291 aaKnown RBP8.65□□□□□ -1.02
BDNF-204ENST00000395980 PCED1BQ96HM7 432 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 BTN2A3PQ96KV6 586 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 NSMCE2Q96MF7 247 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 OSMRQ99650 979 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 PSD2Q9BQI7 771 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 HMG20AQ9NP66 347 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 RNF19AQ9NV58 838 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 BRCA1P38398 1863 aaKnown RBP8.65□□□□□ -1.02
BDNF-204ENST00000395980 TRIM43BA6NCK2 446 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 ASPDHA6ND91 283 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 WASH4PA8MWX3 477 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 IRAK2O43187 625 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 ALPLP05186 524 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 MTHFD2P13995 350 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 HRH2P25021 359 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 ZFP36L2P47974 494 aaKnown RBP8.65□□□□□ -1.02
BDNF-204ENST00000395980 ACVR1Q04771 509 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 PLCL1Q15111 1095 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 RABL3Q5HYI8 236 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 C8orf59Q8N0T1 100 aaPredicted RBP8.65□□□□□ -1.02
BDNF-204ENST00000395980 DPP10Q8N608 796 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 ABHD11Q8NFV4 315 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 GPR150Q8NGU9 434 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 S100ZQ8WXG8 99 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 CCDC138Q96M89 665 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 MUS81Q96NY9 551 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 ATOH8Q96SQ7 321 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 LRRC3Q9BY71 257 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 LHPPQ9H008 270 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 FAM49AQ9H0Q0 323 aaPredicted RBP8.65□□□□□ -1.02
BDNF-204ENST00000395980 PIN4Q9Y237 131 aaKnown RBP8.65□□□□□ -1.02
BDNF-204ENST00000395980 GINS2Q9Y248 185 aa8.65□□□□□ -1.02
BDNF-204ENST00000395980 KATNA1O75449 491 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 UGT2B4P06133 528 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 YAP1P46937 504 aaKnown RBP8.65□□□□□ -1.03
BDNF-204ENST00000395980 OCA2Q04671 838 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 CCDC92Q53HC0 331 aaPredicted RBP8.65□□□□□ -1.03
BDNF-204ENST00000395980 XKR7Q5GH72 579 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 NEK10Q6ZWH5 1172 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 KIAA2013Q8IYS2 634 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 RTL3Q8N8U3 475 aaKnown RBP8.65□□□□□ -1.03
BDNF-204ENST00000395980 DNAJB14Q8TBM8 379 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 FKBP10Q96AY3 582 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 ISG20Q96AZ6 181 aaKnown RBP8.65□□□□□ -1.03
BDNF-204ENST00000395980 SENP8Q96LD8 212 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 FEM1AQ9BSK4 669 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 C1QTNF3Q9BXJ4 246 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 RNF39Q9H2S5 420 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 DNAJC5Q9H3Z4 198 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 NTN4Q9HB63 628 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 NAALAD2Q9Y3Q0 740 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 CPQQ9Y646 472 aa8.65□□□□□ -1.03
BDNF-204ENST00000395980 NYNRINQ9P2P1 1898 aaKnown RBP8.65□□□□□ -1.03
BDNF-204ENST00000395980 C1orf232A0A0U1RR37 186 aa8.64□□□□□ -1.03
BDNF-204ENST00000395980 FAM234BA2RU67 622 aa8.64□□□□□ -1.03
BDNF-204ENST00000395980 CCDC154A6NI56 674 aa8.64□□□□□ -1.03
BDNF-204ENST00000395980 UPK1AO00322 258 aa8.64□□□□□ -1.03
BDNF-204ENST00000395980 SYNCRIPO60506 623 aaKnown RBP8.64□□□□□ -1.03
BDNF-204ENST00000395980 CNOT3O75175 753 aaKnown RBP8.64□□□□□ -1.03
BDNF-204ENST00000395980 MMP3P08254 477 aa8.64□□□□□ -1.03
BDNF-204ENST00000395980 RAP2AP10114 183 aa8.64□□□□□ -1.03
BDNF-204ENST00000395980 ZNF37AP17032 561 aaPredicted RBP8.64□□□□□ -1.03
BDNF-204ENST00000395980 SHMT2P34897 504 aa8.64□□□□□ -1.03
BDNF-204ENST00000395980 PLA2G16P53816 162 aa8.64□□□□□ -1.03
BDNF-204ENST00000395980 FOXA1P55317 472 aa8.64□□□□□ -1.03
BDNF-204ENST00000395980 GNA12Q03113 381 aa8.64□□□□□ -1.03
BDNF-204ENST00000395980 ZNF792Q3KQV3 632 aa8.64□□□□□ -1.03
BDNF-204ENST00000395980 SPARTQ8N0X7 666 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms