RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 GRAMD4Q6IC98 578 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 CCDC149Q6ZUS6 474 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 REM2Q8IYK8 340 aaPredicted RBP6.53□□□□□ -1.36
BDNF-203ENST00000395978 SCML4Q8N228 414 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 CPSF7Q8N684 471 aaKnown RBP6.53□□□□□ -1.36
BDNF-203ENST00000395978 SLAIN1Q8ND83 568 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 SELENOMQ8WWX9 145 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 TMEM159Q96B96 161 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 ROPN1LQ96C74 230 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 UGT2B28Q9BY64 529 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 ZBTB26Q9HCK0 441 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 SPG21Q9NZD8 308 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 LIMD1Q9UGP4 676 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 EVLQ9UI08 416 aaPredicted RBP6.53□□□□□ -1.36
BDNF-203ENST00000395978 MOSPD1Q9UJG1 213 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 EMCNQ9ULC0 261 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 AP3M1Q9Y2T2 418 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 USP3Q9Y6I4 520 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 CITO14578 2027 aa6.53□□□□□ -1.36
BDNF-203ENST00000395978 GREB1LQ9C091 1923 aaPredicted RBP6.53□□□□□ -1.36
BDNF-203ENST00000395978 GOLGA4Q13439 2230 aaKnown RBP6.53□□□□□ -1.36
BDNF-203ENST00000395978 A0A087WXM4 84 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 A0A088AWK7 358 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 PRKCGP05129 697 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 SLC10A3P09131 477 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 GSTT1P30711 240 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 RAD23AP54725 363 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 NR1H2P55055 460 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 AP1S1P61966 158 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 HIST2H2ACQ16777 129 aaPredicted RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 RNF220Q5VTB9 566 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 HIST2H2AA3Q6FI13 130 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 PIM3Q86V86 326 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 EGFL6Q8IUX8 553 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 CEP97Q8IW35 865 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 CPNE9Q8IYJ1 553 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 ZNF557Q8N988 423 aaPredicted RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 CAPNS2Q96L46 248 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 C11orf84Q9BUA3 381 aaPredicted RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 SPATA16Q9BXB7 569 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 SEZ6LQ9BYH1 1024 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 GRIP2Q9C0E4 1043 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 ARHGAP39Q9C0H5 1083 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 EBF3Q9H4W6 596 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 KIAA1522Q9P206 1035 aaPredicted RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 SPASTQ9UBP0 616 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 DYTNA2CJ06 578 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 G3V2L1 256 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 SLC25A14O95258 325 aaPredicted RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 UROSP10746 265 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 PPM1AP35813 382 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 RPL34P49207 117 aaKnown RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 AQP4P55087 323 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 MTTPP55157 894 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 RPL38P63173 70 aaKnown RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 VAC14Q08AM6 782 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 TRIM32Q13049 653 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 ZDHHC13Q8IUH4 622 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 DCBLD1Q8N8Z6 715 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 TSPAN14Q8NG11 270 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 OR2T34Q8NGX1 318 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 OR2T3Q8NH03 318 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 PEX13Q92968 403 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 IGSF8Q969P0 613 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 MOCOSQ96EN8 888 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 AARSD1Q9BTE6 412 aaKnown RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 GPR62Q9BZJ7 368 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 MTIF3Q9H2K0 278 aaKnown RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 ZDHHC6Q9H6R6 413 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 NOL11Q9H8H0 719 aaKnown RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 ZNHIT2Q9UHR6 403 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 SSC5DA1L4H1 1573 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 MGAT4DA6NG13 374 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 CAPN14A8MX76 684 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 C9JVG2 144 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 STX16-NPEPL1H3BU86 382 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 AHCYL1O43865 530 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 LZTS3O60299 673 aaPredicted RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 MGEA5O60502 916 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 TIPRLO75663 272 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 KCNH1O95259 989 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 PRAMEF1O95521 474 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 CYP2A6P11509 494 aaPredicted RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 DDX5P17844 614 aaKnown RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 TNK2Q07912 1038 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 TRAF2Q12933 501 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 ADGRE1Q14246 886 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 AP5B1Q2VPB7 878 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 LIN52Q52LA3 116 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 NAPRTQ6XQN6 538 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 SZRD1Q7Z422 152 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 HORMAD1Q86X24 394 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 ARHGAP12Q8IWW6 846 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 ARL14EPQ8N8R7 260 aaPredicted RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 ESAMQ96AP7 390 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 CIB1Q99828 191 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 CORO1BQ9BR76 489 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 TSEN34Q9BSV6 310 aaKnown RBP6.52□□□□□ -1.37
BDNF-203ENST00000395978 TBCDQ9BTW9 1192 aa6.52□□□□□ -1.37
BDNF-203ENST00000395978 NUSAP1Q9BXS6 441 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms