RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 TEX44Q53QW1 395 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.04■□□□□ 0.16
CXCL12-206ENST00000395795 ARHGAP40Q5TG30 622 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 USP53Q70EK8 1073 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 TMC3Q7Z5M5 1100 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 RHOT1Q8IXI2 618 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 SFRP1Q8N474 314 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 SLC39A7Q92504 469 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 PMEPA1Q969W9 287 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 AGAP3Q96P47 875 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 HERPUD2Q9BSE4 406 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 CDH19Q9H159 772 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 FAM83DQ9H4H8 585 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 FOXJ2Q9P0K8 574 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 TMEM9Q9P0T7 183 aa16.04■□□□□ 0.16
CXCL12-206ENST00000395795 NFKBIL1Q9UBC1 381 aaPredicted RBP16.04■□□□□ 0.16
CXCL12-206ENST00000395795 IGHV1OR21-1A0A087WYE8 117 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 RGSL1A5PLK6 1076 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 RCCD1A6NED2 376 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 K7ENP7 123 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 TK2O00142 265 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 AGRPO00253 132 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 AURKAO14965 403 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 NVLO15381 856 aaKnown RBP16.03■□□□□ 0.16
CXCL12-206ENST00000395795 CCL4P13236 92 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 CA4P22748 312 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 FECHP22830 423 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 GPR3P46089 330 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 FASLGP48023 281 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 DYNLT1P63172 113 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 LLGL1Q15334 1064 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 ZFYVE27Q5T4F4 411 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 ZNF648Q5T619 568 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-206ENST00000395795 NKAIN2Q5VXU1 208 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 INO80CQ6PI98 192 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-206ENST00000395795 KDELC1Q6UW63 502 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 SPOCD1Q6ZMY3 1216 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 KDELC2Q7Z4H8 507 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 NT5DC3Q86UY8 548 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 DTX1Q86Y01 620 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 RFX6Q8HWS3 928 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 LSM14AQ8ND56 463 aaKnown RBP16.03■□□□□ 0.16
CXCL12-206ENST00000395795 SLC37A2Q8TED4 501 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 TEKT5Q96M29 485 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 ZNF830Q96NB3 372 aaPredicted RBP16.03■□□□□ 0.16
CXCL12-206ENST00000395795 STRADBQ9C0K7 418 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 GLOD4Q9HC38 313 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 MAGEE1Q9HCI5 957 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 DDX56Q9NY93 547 aaKnown RBP16.03■□□□□ 0.16
CXCL12-206ENST00000395795 ATXN10Q9UBB4 475 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 TBC1D29Q9UFV1 150 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 PISDQ9UG56 409 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 SHOC2Q9UQ13 582 aa16.03■□□□□ 0.16
CXCL12-206ENST00000395795 hCG_1818297A0A087WSY0 165 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 PRAMEF33A0A0G2JMD5 474 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 PSTPIP1O43586 416 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 PRAMEF10O60809 474 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 TNNT1P13805 278 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 ZFXP17010 805 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-206ENST00000395795 ALDH4A1P30038 563 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 UCNP55089 124 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 DCDC1P59894 354 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 CDK18Q07002 472 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 VAC14Q08AM6 782 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 LRP8Q14114 963 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 NOMO1Q15155 1222 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 CLPPQ16740 277 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-206ENST00000395795 AMZ1Q400G9 498 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 KHDC1Q4VXA5 237 aaKnown RBP16.02■□□□□ 0.16
CXCL12-206ENST00000395795 ZNF761Q86XN6 746 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-206ENST00000395795 GALNT13Q8IUC8 556 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.02■□□□□ 0.16
CXCL12-206ENST00000395795 KRT35Q92764 455 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 GORASP1Q9BQQ3 440 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 ZFYVE1Q9HBF4 777 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 ARFGAP3Q9NP61 516 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 PDP2Q9P2J9 529 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 REXO2Q9Y3B8 237 aaKnown RBP16.02■□□□□ 0.16
CXCL12-206ENST00000395795 ZNF711Q9Y462 761 aa16.02■□□□□ 0.16
CXCL12-206ENST00000395795 ATMQ13315 3056 aa16.02■□□□□ 0.15
CXCL12-206ENST00000395795 TRBV23OR9-2A0A075B6M9 112 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 LOC285095A0A1B0GVY8 99 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 RHPN2P1A8MT19 583 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 PPP1R12AO14974 1030 aaPredicted RBP16.01■□□□□ 0.15
CXCL12-206ENST00000395795 CHUKO15111 745 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 NUAK1O60285 661 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 CST8O60676 142 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 TPM1P09493 284 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 ZNF8P17098 575 aaPredicted RBP16.01■□□□□ 0.15
CXCL12-206ENST00000395795 BPIP17213 487 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 WT1P19544 449 aaPredicted RBP16.01■□□□□ 0.15
CXCL12-206ENST00000395795 CA5AP35218 305 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 MAGEA1P43355 309 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 NR2C2P49116 596 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 LIMK2P53671 638 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 IYDQ6PHW0 289 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 ADGRG6Q86SQ4 1221 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 PIM3Q86V86 326 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 KATNAL2Q8IYT4 538 aa16.01■□□□□ 0.15
CXCL12-206ENST00000395795 TTC30BQ8N4P2 665 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms