RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PRSS38A1L453 326 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 CTAGE15A4D2H0 777 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 C2orf81A6NN90 581 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 STX7O15400 261 aaKnown RBP16.43■□□□□ 0.22
CXCL1-201ENST00000395761 AQP9O43315 295 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 LDB2O43679 373 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 CRTAMO95727 393 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 TNFP01375 233 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 CTAGE8P0CG41 777 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 SPAM1P38567 509 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 BASP1P80723 227 aaKnown RBP16.43■□□□□ 0.22
CXCL1-201ENST00000395761 GPS1Q13098 491 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 POU6F1Q14863 301 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 TRIP6Q15654 476 aaKnown RBP16.43■□□□□ 0.22
CXCL1-201ENST00000395761 CHRNA6Q15825 494 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 FAM151BQ6UXP7 276 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 PPP1R21Q6ZMI0 780 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 MICALCLQ6ZW33 695 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 CTAGE6Q86UF2 777 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 CTAGE4Q8IX94 777 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 OR4K2Q8NGD2 314 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 BTN2A2Q8WVV5 523 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 PLEKHG4BQ96PX9 1271 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 ZSCAN5AQ9BUG6 496 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 CARD6Q9BX69 1037 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 TMEM168Q9H0V1 697 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 SUDS3Q9H7L9 328 aaPredicted RBP16.43■□□□□ 0.22
CXCL1-201ENST00000395761 CASS4Q9NQ75 786 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 SUFUQ9UMX1 484 aa16.43■□□□□ 0.22
CXCL1-201ENST00000395761 TCRBV7S3A2A0A539 114 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 CCL22O00626 93 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 GAPDHSO14556 408 aaPredicted RBP16.42■□□□□ 0.22
CXCL1-201ENST00000395761 GPR39O43194 453 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 SIGLEC6O43699 453 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 UGT1A9O60656 530 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 ASMTLO95671 621 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 CTSEP14091 401 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 UGT1A6P19224 532 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 UGT1A1P22309 533 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 UGT1A4P22310 534 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 UGT1A3P35503 534 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 UGT1A5P35504 534 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 BLKP51451 505 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 ZNF140P52738 457 aaPredicted RBP16.42■□□□□ 0.22
CXCL1-201ENST00000395761 TMPRSS15P98073 1019 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 CDH17Q12864 832 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 INAVAQ3KP66 663 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 ATP13A5Q4VNC0 1218 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 CERCAMQ5T4B2 595 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 MARK2Q7KZI7 788 aaKnown RBP16.42■□□□□ 0.22
CXCL1-201ENST00000395761 MMGT1Q8N4V1 131 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 DNAAF3Q8N9W5 541 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 OR13C4Q8NGS5 318 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 GRK7Q8WTQ7 553 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 CARS2Q9HA77 564 aaKnown RBP16.42■□□□□ 0.22
CXCL1-201ENST00000395761 UGT1A7Q9HAW7 530 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 UGT1A10Q9HAW8 530 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 UGT1A8Q9HAW9 530 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 EIF2B3Q9NR50 452 aaKnown RBP16.42■□□□□ 0.22
CXCL1-201ENST00000395761 FKBPLQ9UIM3 349 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 PCYT1BQ9Y5K3 369 aaPredicted RBP16.42■□□□□ 0.22
CXCL1-201ENST00000395761 CSNK1G3Q9Y6M4 447 aa16.42■□□□□ 0.22
CXCL1-201ENST00000395761 CNOT1A5YKK6 2376 aaKnown RBP16.42■□□□□ 0.22
CXCL1-201ENST00000395761 SCN8AQ9UQD0 1980 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.41■□□□□ 0.22
CXCL1-201ENST00000395761 GLYATL1P3A0A0U1RQE8 302 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 NEMP2A6NFY4 417 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 YY2O15391 372 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 PPFIA2O75334 1257 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 SLC25A14O95258 325 aaPredicted RBP16.41■□□□□ 0.22
CXCL1-201ENST00000395761 MYF5P13349 255 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 PTGIRP43119 386 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 GNPDA1P46926 289 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 SIM1P81133 766 aaPredicted RBP16.41■□□□□ 0.22
CXCL1-201ENST00000395761 SEPT6Q14141 434 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 DEFB133Q30KQ1 61 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 CCDC38Q502W7 563 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 ANKRD22Q5VYY1 191 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 ZDHHC20Q5W0Z9 365 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 KLHL7Q8IXQ5 586 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 OR4C6Q8NH72 309 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 CCL4L1Q8NHW4 92 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 GLYATL1Q969I3 302 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 SCARF2Q96GP6 870 aaPredicted RBP16.41■□□□□ 0.22
CXCL1-201ENST00000395761 DNAJC1Q96KC8 554 aaKnown RBP16.41■□□□□ 0.22
CXCL1-201ENST00000395761 TBATAQ96M53 351 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 CDC6Q99741 560 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 NLGN3Q9NZ94 848 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 PLEKHM1Q9Y4G2 1056 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 LRP4O75096 1905 aa16.41■□□□□ 0.22
CXCL1-201ENST00000395761 CCDC78A2IDD5 438 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 LMO7DNF2Z398 122 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 DNAJC6O75061 913 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 MTX2O75431 263 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 ECEL1O95672 775 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 LDOC1O95751 146 aaPredicted RBP16.4■□□□□ 0.22
CXCL1-201ENST00000395761 IVLP07476 585 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 XIAPP98170 497 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 PDE1BQ01064 536 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 C2orf54Q08AI8 447 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms