RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 OAS3Q9Y6K5 1087 aaKnown RBP20.94■□□□□ 0.94
TRAF4-203ENST00000394925 SCINQ9Y6U3 715 aa20.94■□□□□ 0.94
TRAF4-203ENST00000394925 USP9XQ93008 2570 aaPredicted RBP20.94■□□□□ 0.94
TRAF4-203ENST00000394925 SPTAN1Q13813 2472 aaKnown RBP20.93■□□□□ 0.94
TRAF4-203ENST00000394925 LRRC53A6NM62 1247 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 POLR1CO15160 346 aaPredicted RBP20.93■□□□□ 0.94
TRAF4-203ENST00000394925 SNX2O60749 519 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 DNAJC6O75061 913 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 RARAP10276 462 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 TCN2P20062 427 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 SERPINB6P35237 376 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 STC1P52823 247 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 MC1RQ01726 317 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 ASIC2Q16515 512 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 LACTB2Q53H82 288 aaPredicted RBP20.93■□□□□ 0.94
TRAF4-203ENST00000394925 IYDQ6PHW0 289 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 ZNF571Q7Z3V5 609 aaPredicted RBP20.93■□□□□ 0.94
TRAF4-203ENST00000394925 SH3KBP1Q96B97 665 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 RNF31Q96EP0 1072 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 CHKBQ9Y259 395 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 PLAAQ9Y263 795 aa20.93■□□□□ 0.94
TRAF4-203ENST00000394925 MRPS18BQ9Y676 258 aaKnown RBP20.93■□□□□ 0.94
TRAF4-203ENST00000394925 CLEC18AA5D8T8 446 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 CLDN7O95471 211 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 GZMAP12544 262 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 ACP5P13686 325 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 NOP2P46087 812 aaKnown RBP20.92■□□□□ 0.94
TRAF4-203ENST00000394925 SEPT6Q14141 434 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 TXNRD3NBQ6F5E7 133 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 CLEC18BQ6UXF7 455 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 SLC9B2Q86UD5 537 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 LURAP1LQ8IV03 231 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 TEX26Q8N6G2 289 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 CLEC18CQ8NCF0 446 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 TBC1D10AQ9BXI6 508 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 POLR1EQ9GZS1 481 aaKnown RBP20.92■□□□□ 0.94
TRAF4-203ENST00000394925 HSD3B7Q9H2F3 369 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 PCDH18Q9HCL0 1135 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 MRPL47Q9HD33 250 aaKnown RBP20.92■□□□□ 0.94
TRAF4-203ENST00000394925 ANO10Q9NW15 660 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 VPS18Q9P253 973 aa20.92■□□□□ 0.94
TRAF4-203ENST00000394925 CNOT6Q9ULM6 557 aaKnown RBP20.92■□□□□ 0.94
TRAF4-203ENST00000394925 PRR19A6NJB7 356 aa20.91■□□□□ 0.94
TRAF4-203ENST00000394925 DDX3XO00571 662 aaKnown RBP eCLIP20.91■□□□□ 0.942e-23■■■■■ 60.9
TRAF4-203ENST00000394925 DLGAP3O95886 979 aa20.91■□□□□ 0.94
TRAF4-203ENST00000394925 STAT5AP42229 794 aa20.91■□□□□ 0.94
TRAF4-203ENST00000394925 EPHA4P54764 986 aa20.91■□□□□ 0.94
TRAF4-203ENST00000394925 DSC2Q02487 901 aa20.91■□□□□ 0.94
TRAF4-203ENST00000394925 IHHQ14623 411 aa20.91■□□□□ 0.94
TRAF4-203ENST00000394925 SASS6Q6UVJ0 657 aa20.91■□□□□ 0.94
TRAF4-203ENST00000394925 RBM43Q6ZSC3 357 aaKnown RBP20.91■□□□□ 0.94
TRAF4-203ENST00000394925 HERPUD2Q9BSE4 406 aa20.91■□□□□ 0.94
TRAF4-203ENST00000394925 LMBRD1Q9NUN5 540 aa20.91■□□□□ 0.94
TRAF4-203ENST00000394925 TP53TG5Q9Y2B4 290 aa20.91■□□□□ 0.94
TRAF4-203ENST00000394925 MAN2B2Q9Y2E5 1009 aa20.91■□□□□ 0.94
TRAF4-203ENST00000394925 RPS6KL1Q9Y6S9 549 aa20.91■□□□□ 0.94
TRAF4-203ENST00000394925 A6NCN8 305 aa20.9■□□□□ 0.94
TRAF4-203ENST00000394925 SLC2A4P14672 509 aa20.9■□□□□ 0.94
TRAF4-203ENST00000394925 F8A1P23610 371 aa20.9■□□□□ 0.94
TRAF4-203ENST00000394925 E4F1Q66K89 784 aaPredicted RBP20.9■□□□□ 0.94
TRAF4-203ENST00000394925 LYSMD3Q7Z3D4 306 aa20.9■□□□□ 0.94
TRAF4-203ENST00000394925 ESX1Q8N693 406 aa20.9■□□□□ 0.94
TRAF4-203ENST00000394925 WDR24Q96S15 920 aa20.9■□□□□ 0.94
TRAF4-203ENST00000394925 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.9■□□□□ 0.94
TRAF4-203ENST00000394925 CPNE7Q9UBL6 633 aa20.9■□□□□ 0.94
TRAF4-203ENST00000394925 DNPEPQ9ULA0 475 aa20.9■□□□□ 0.94
TRAF4-203ENST00000394925 TTLL3Q9Y4R7 772 aa20.9■□□□□ 0.94
TRAF4-203ENST00000394925 SPTBN1Q01082 2364 aaKnown RBP20.9■□□□□ 0.94
TRAF4-203ENST00000394925 F3P13726 295 aa20.89■□□□□ 0.93
TRAF4-203ENST00000394925 NR1D1P20393 614 aa20.89■□□□□ 0.93
TRAF4-203ENST00000394925 FOXM1Q08050 763 aa20.89■□□□□ 0.93
TRAF4-203ENST00000394925 KLRB1Q12918 225 aa20.89■□□□□ 0.93
TRAF4-203ENST00000394925 MMRN1Q13201 1228 aa20.89■□□□□ 0.93
TRAF4-203ENST00000394925 STX1AQ16623 288 aa20.89■□□□□ 0.93
TRAF4-203ENST00000394925 CRTC2Q53ET0 693 aaPredicted RBP20.89■□□□□ 0.93
TRAF4-203ENST00000394925 PLXDC1Q8IUK5 500 aa20.89■□□□□ 0.93
TRAF4-203ENST00000394925 FAM26EQ8N5C1 309 aa20.89■□□□□ 0.93
TRAF4-203ENST00000394925 TRIM11Q96F44 468 aa20.89■□□□□ 0.93
TRAF4-203ENST00000394925 TDRD1Q9BXT4 1180 aaKnown RBP20.89■□□□□ 0.93
TRAF4-203ENST00000394925 ULBP3Q9BZM4 244 aa20.89■□□□□ 0.93
TRAF4-203ENST00000394925 EPB41L1Q9H4G0 881 aa20.89■□□□□ 0.93
TRAF4-203ENST00000394925 SIDT1Q9NXL6 827 aaKnown RBP20.89■□□□□ 0.93
TRAF4-203ENST00000394925 KCNMB2Q9Y691 235 aa20.89■□□□□ 0.93
TRAF4-203ENST00000394925 RP1L1Q8IWN7 2480 aaPredicted RBP20.89■□□□□ 0.93
TRAF4-203ENST00000394925 SPENQ96T58 3664 aaKnown RBP20.89■□□□□ 0.93
TRAF4-203ENST00000394925 NBPF19A0A087WUL8 3843 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 KIR2DS5A0A0G2JLQ3 304 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 A0A0G2JNG1 304 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 FADS2P1A8MWK0 482 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 KIR2DS3K7RE56 304 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 MTSS1O43312 755 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 PRLP01236 227 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 MYBL1P10243 752 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 ZNF28P17035 718 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 DLSTP36957 453 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 GFERP55789 205 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 KLHL30Q0D2K2 578 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 MAP7Q14244 749 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 KRT81Q14533 505 aa20.88■□□□□ 0.93
TRAF4-203ENST00000394925 KIR2DS5Q14953 304 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms