RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 NLGN2Q8NFZ4 835 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 NIFKQ9BYG3 293 aaKnown RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 TRMT13Q9NUP7 481 aaKnown RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 ROBO3Q96MS0 1386 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 NDST3O95803 873 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 ADSSP30520 456 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 EIF2B2P49770 351 aaKnown RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 UBXN2BQ14CS0 331 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 CUZD1Q86UP6 607 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 JAZF1Q86VZ6 243 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 RCN3Q96D15 328 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 ACBD6Q9BR61 282 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 DPEP3Q9H4B8 488 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 RHOJQ9H4E5 214 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 FCF1Q9Y324 198 aaKnown RBP10.35□□□□□ -0.75
COL4A6-203ENST00000394872 TRAF6Q9Y4K3 522 aa10.35□□□□□ -0.75
COL4A6-203ENST00000394872 KDM4FA0A1W2PPD8 638 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 OR2AG2A6NM03 316 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 DSC2Q02487 901 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 GAD2Q05329 585 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 NOMO1Q15155 1222 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 NDUFA5Q16718 116 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 VARS2Q5ST30 1063 aaKnown RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 VITQ6UXI7 678 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 OAFQ86UD1 273 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 AHI1Q8N157 1196 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 FNIP1Q8TF40 1166 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 PLD4Q96BZ4 506 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 JSRP1Q96MG2 331 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 KREMEN1Q96MU8 473 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 GBA3Q9H227 469 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 POLMQ9NP87 494 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 KLRG2A4D1S0 409 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 SLC38A8A6NNN8 435 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 IDH3BO43837 385 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 DMPKQ09013 629 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 PDK4Q16654 411 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 CRY2Q49AN0 593 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 PYDC2Q56P42 97 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 CXXC5Q7LFL8 322 aaKnown RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 SPATA19Q7Z5L4 167 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 IRF2BP2Q7Z5L9 587 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 OR7A2PQ8NGA2 310 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 ACSS3Q9H6R3 686 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 CPQQ9Y646 472 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 SCAMP1O15126 338 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 MAGEB3O15480 346 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 SERPINA6P08185 405 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 ALPPL2P10696 532 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 ARL2P36404 184 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 GPD2P43304 727 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 CHN2P52757 468 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 ILF3Q12906 894 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 DLG2Q15700 870 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 PRSS55Q6UWB4 352 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 PTCHD4Q6ZW05 846 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 PEX5LQ8IYB4 626 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 UBR7Q8N806 425 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 SLC43A3Q8NBI5 491 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 DNASE1L2Q92874 299 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 HMCESQ96FZ2 354 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 PCED1BQ96HM7 432 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 PDCD10Q9BUL8 212 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 IKZF4Q9H2S9 585 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 RCOR3Q9P2K3 495 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 HBS1LQ9Y450 684 aaKnown RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 IQCF5A8MTL0 148 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 FSCN2O14926 492 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 TP73O15350 636 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 PPP1R11O60927 126 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 CST3P01034 146 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 CHRNGP07510 517 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 MAT2AP31153 395 aaKnown RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 C2orf80Q0P641 193 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 MINDY4Q4G0A6 757 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 MSANTD2Q6P1R3 559 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 ALYREFQ86V81 257 aaKnown RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 DQX1Q8TE96 717 aaKnown RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 SNX27Q96L92 541 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 SLC38A3Q99624 504 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 PNPOQ9NVS9 261 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 ALKBH4Q9NXW9 302 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 COMMD9Q9P000 198 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 LIN7AO14910 233 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 POP4O95707 220 aaKnown RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 RPL17P18621 184 aaKnown RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 DGKGP49619 791 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 GNA12Q03113 381 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 NAE1Q13564 534 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 PNPT1Q8TCS8 783 aaKnown RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 SLC9A6Q92581 669 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 C15orf41Q9Y2V0 281 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 A0A1B0GVM2 712 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 TCAF2A6NFQ2 919 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 CLDN4O14493 209 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 NRG1Q02297 640 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-203ENST00000394872 LAPTM5Q13571 262 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 DUPD1Q68J44 220 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 IRGCQ6NXR0 463 aa10.34□□□□□ -0.75
COL4A6-203ENST00000394872 APOLD1Q96LR9 279 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms