RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MAP7D3Q8IWC1 876 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 IL22RA1Q8N6P7 574 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 FAF2Q96CS3 445 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 AHCYL2Q96HN2 611 aaKnown RBP17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 AGAP2Q99490 1192 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 HERPUD2Q9BSE4 406 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 RIOK2Q9BVS4 552 aaKnown RBP17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 STN1Q9H668 368 aaKnown RBP17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 PCDH9Q9HC56 1237 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 RBM22Q9NW64 420 aaKnown RBP eCLIP17.35■□□□□ 0.373e-9■■■■■ 38.6
SNRPA1-202ENST00000394082 SLC39A1Q9NY26 324 aa17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 CNOT6Q9ULM6 557 aaKnown RBP17.35■□□□□ 0.37
SNRPA1-202ENST00000394082 A0A087X0T9 212 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 A0A0U1RQS6 177 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 A6NCN8 305 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 OR5K4A6NMS3 321 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 AGRPO00253 132 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 FAM228BP0C875 321 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 SPINT3P49223 89 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 CLCNKAP51800 687 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 ZBED6P86452 979 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 MC2RQ01718 297 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 DSC2Q02487 901 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 HHEXQ03014 270 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 MMRN1Q13201 1228 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 ANKRD20A8PQ5CZ79 823 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 ALKBH5Q6P6C2 394 aaKnown RBP17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 IYDQ6PHW0 289 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 TRIM74Q86UV6 250 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 CACNA2D3Q8IZS8 1091 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 PMEPA1Q969W9 287 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 HDAC11Q96DB2 347 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 BTBD6Q96KE9 485 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 WDR24Q96S15 920 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 EFHD1Q9BUP0 239 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 FBXO8Q9NRD0 319 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 OCIAD1Q9NX40 245 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 PILRAQ9UKJ1 303 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 CAPN11Q9UMQ6 739 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 CHKBQ9Y259 395 aa17.34■□□□□ 0.37
SNRPA1-202ENST00000394082 KIR2DS5A0A0G2JLQ3 304 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 A0A0G2JNG1 304 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 ANKRD66B4E2M5 251 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 GPR89AB7ZAQ6 455 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 KIR2DS3K7RE56 304 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 CLDN7O95471 211 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 KRT7P08729 469 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 GPR89BP0CG08 455 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 MAP4P27816 1152 aaKnown RBP17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 CYP4F2P78329 520 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 KIR2DS5Q14953 304 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 CLCA4Q14CN2 919 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 MARK2Q7KZI7 788 aaKnown RBP17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 LYSMD3Q7Z3D4 306 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 KCTD6Q8NC69 237 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 CCHCR1Q8TD31 782 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 SLC45A3Q96JT2 553 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 SMIM14Q96QK8 99 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 CARD9Q9H257 536 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 FAM83DQ9H4H8 585 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 PKD2L2Q9NZM6 624 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 TMEM9Q9P0T7 183 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 UVRAGQ9P2Y5 699 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 ZNHIT2Q9UHR6 403 aa17.33■□□□□ 0.36
SNRPA1-202ENST00000394082 EFCAB7A8K855 629 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 ZNF891A8MT65 544 aaPredicted RBP17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 INPP4BO15327 924 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 RAD1O60671 282 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 MAP3K6O95382 1288 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 ASMTLO95671 621 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 EML2O95834 649 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 F3P13726 295 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 LIFP15018 202 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 NIPAL4Q0D2K0 466 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 CRTC2Q53ET0 693 aaPredicted RBP17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 CEACAM20Q6UY09 585 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 SLC9B2Q86UD5 537 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 FAM129CQ86XR2 697 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 ZNF564Q8TBZ8 553 aaPredicted RBP17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 RTP4Q96DX8 246 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 MLPHQ9BV36 600 aaPredicted RBP17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 ADGRE3Q9BY15 652 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 TRIT1Q9H3H1 467 aaKnown RBP17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 UCK1Q9HA47 277 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 NFKBIL1Q9UBC1 381 aaPredicted RBP17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 TBC1D29Q9UFV1 150 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 NENFQ9UMX5 172 aa17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 TMEM184BQ9Y519 407 aaPredicted RBP17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 OAS3Q9Y6K5 1087 aaKnown RBP17.32■□□□□ 0.36
SNRPA1-202ENST00000394082 MAST4O15021 2626 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 C1orf232A0A0U1RR37 186 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 ZNF487B1APH4 448 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 ARHGAP6O43182 974 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 NUAK1O60285 661 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 PROSCO94903 275 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 ATP1A1P05023 1023 aaKnown RBP17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 HLA-DQB2P05538 268 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 ANKRD34CP0C6C1 535 aa17.31■□□□□ 0.36
SNRPA1-202ENST00000394082 MPSTP25325 297 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms