RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 HMBOX1Q6NT76 420 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 CHERPQ8IWX8 916 aaKnown RBP12.24□□□□□ -0.45
RFC5-201ENST00000392542 MINDY1Q8N5J2 469 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.24□□□□□ -0.45
RFC5-201ENST00000392542 ZUFSPQ96AP4 578 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 LRCH3Q96II8 777 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 GPR21Q99679 349 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 VCX3AQ9NNX9 186 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 SEMA4BQ9NPR2 832 aaPredicted RBP12.24□□□□□ -0.45
RFC5-201ENST00000392542 SDR39U1Q9NRG7 319 aaPredicted RBP12.24□□□□□ -0.45
RFC5-201ENST00000392542 RNF186Q9NXI6 227 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 GMPR2Q9P2T1 348 aaKnown RBP12.24□□□□□ -0.45
RFC5-201ENST00000392542 HCSTQ9UBK5 93 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 SNX13Q9Y5W8 968 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 AK5Q9Y6K8 562 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 CDC7O00311 574 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 ENPP3O14638 875 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 STX16O14662 325 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 CLDN11O75508 207 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 OR6B1O95007 311 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 GJB5O95377 273 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 PRLP01236 227 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 PYGLP06737 847 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 RHOCP08134 193 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 LINC00032P0C843 101 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 HGFP14210 728 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 PSMC3P17980 439 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 NAA20P61599 178 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 RPS24P62847 133 aaKnown RBP12.23□□□□□ -0.45
RFC5-201ENST00000392542 CYTH1Q15438 398 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 NRF1Q16656 503 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 PTPRNQ16849 979 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 VPS26BQ4G0F5 336 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 COQ5Q5HYK3 327 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 IYDQ6PHW0 289 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 ISLR2Q6UXK2 745 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 OSBPL11Q9BXB4 747 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 C1QTNF3Q9BXJ4 246 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 IL1RL2Q9HB29 575 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 ARMC1Q9NVT9 282 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 VPS9D1Q9Y2B5 631 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 A0A1B0GTL3 188 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 ILVBLA1L0T0 632 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 NPEPPSL1A6NEC2 478 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 NT5C1B-RDH14C9J2C7 533 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 FXYD1O00168 92 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 KLK8O60259 260 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 CRCPO75575 148 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 PKMP14618 531 aaKnown RBP12.23□□□□□ -0.45
RFC5-201ENST00000392542 IDO1P14902 403 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 ETS2P15036 469 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 LPOP22079 712 aaPredicted RBP12.23□□□□□ -0.45
RFC5-201ENST00000392542 CALRP27797 417 aaKnown RBP12.23□□□□□ -0.45
RFC5-201ENST00000392542 GRIA3P42263 894 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 CDKN1CP49918 316 aaPredicted RBP12.23□□□□□ -0.45
RFC5-201ENST00000392542 TXNL4AP83876 142 aaKnown RBP12.23□□□□□ -0.45
RFC5-201ENST00000392542 APOFQ13790 326 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 RPS6KA2Q15349 733 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 OGFOD2Q6N063 350 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 ANKS3Q6ZW76 656 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 LRRC8DQ7L1W4 858 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 SPATA19Q7Z5L4 167 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 SLC43A3Q8NBI5 491 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 LPCAT1Q8NF37 534 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 FUBP1Q96AE4 644 aaKnown RBP12.23□□□□□ -0.45
RFC5-201ENST00000392542 SMIM14Q96QK8 99 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 PRPF18Q99633 342 aaKnown RBP12.23□□□□□ -0.45
RFC5-201ENST00000392542 NUSAP1Q9BXS6 441 aaKnown RBP12.23□□□□□ -0.45
RFC5-201ENST00000392542 TRIM15Q9C019 465 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 NACA2Q9H009 215 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 GID8Q9NWU2 228 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 AGO1Q9UL18 857 aaKnown RBP12.23□□□□□ -0.45
RFC5-201ENST00000392542 PADI4Q9UM07 663 aa12.23□□□□□ -0.45
RFC5-201ENST00000392542 AQP12BA6NM10 295 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 BTN3A1O00481 513 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 VPS26AO75436 327 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 F11P03951 625 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 PRR35P0CG20 571 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 HSD17B1P14061 328 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 CES1P23141 567 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 MRPL19P49406 292 aaKnown RBP12.22□□□□□ -0.45
RFC5-201ENST00000392542 FOXM1Q08050 763 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 BNIP2Q12982 314 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 PABPC1LQ4VXU2 614 aaKnown RBP12.22□□□□□ -0.45
RFC5-201ENST00000392542 PSAPL1Q6NUJ1 521 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 TXNDC11Q6PKC3 985 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 BLOC1S3Q6QNY0 202 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 PRSS55Q6UWB4 352 aaPredicted RBP12.22□□□□□ -0.45
RFC5-201ENST00000392542 TAS1R1Q7RTX1 841 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 EFL1Q7Z2Z2 1120 aaKnown RBP12.22□□□□□ -0.45
RFC5-201ENST00000392542 AMIGO2Q86SJ2 522 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 DENND1CQ8IV53 801 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 AQP12AQ8IXF9 295 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 SLC15A3Q8IY34 581 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 ANKFN1Q8N957 763 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 PDZD8Q8NEN9 1154 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 DGCR14Q96DF8 476 aaKnown RBP12.22□□□□□ -0.45
RFC5-201ENST00000392542 BIRC8Q96P09 236 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 SLC30A3Q99726 388 aa12.22□□□□□ -0.45
RFC5-201ENST00000392542 ZBED2Q9BTP6 218 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms