RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 SLC37A2Q8TED4 501 aa16.46■□□□□ 0.23
PTPRK-208ENST00000392449 LYSMD1Q96S90 227 aa16.46■□□□□ 0.23
PTPRK-208ENST00000392449 ABHD10Q9NUJ1 306 aa16.46■□□□□ 0.23
PTPRK-208ENST00000392449 SEPT10Q9P0V9 454 aa16.46■□□□□ 0.23
PTPRK-208ENST00000392449 AMACRQ9UHK6 382 aa16.46■□□□□ 0.23
PTPRK-208ENST00000392449 ZNHIT2Q9UHR6 403 aa16.46■□□□□ 0.23
PTPRK-208ENST00000392449 ACSL6Q9UKU0 697 aa16.46■□□□□ 0.23
PTPRK-208ENST00000392449 KCNK6Q9Y257 313 aa16.46■□□□□ 0.23
PTPRK-208ENST00000392449 SSU72P8A0A1W2PR75 194 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 ANKRD66B4E2M5 251 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 KRT1P04264 644 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 TPM3P06753 285 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 LIPCP11150 499 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 CA4P22748 312 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 CES1P23141 567 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 ARSDP51689 593 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 DYNLT1P63172 113 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 IFI35P80217 286 aaPredicted RBP16.45■□□□□ 0.22
PTPRK-208ENST00000392449 LLGL1Q15334 1064 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 HENMT1Q5T8I9 393 aaKnown RBP16.45■□□□□ 0.22
PTPRK-208ENST00000392449 ALS2CLQ60I27 953 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 CHST15Q7LFX5 561 aaPredicted RBP16.45■□□□□ 0.22
PTPRK-208ENST00000392449 NRSN1Q8IZ57 195 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 RNF25Q96BH1 459 aaPredicted RBP16.45■□□□□ 0.22
PTPRK-208ENST00000392449 ZNF830Q96NB3 372 aaPredicted RBP16.45■□□□□ 0.22
PTPRK-208ENST00000392449 AGAP3Q96P47 875 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 KCNK4Q9NYG8 393 aa16.45■□□□□ 0.22
PTPRK-208ENST00000392449 MFAP3LO75121 409 aa16.44■□□□□ 0.22
PTPRK-208ENST00000392449 FGF3P11487 239 aaPredicted RBP16.44■□□□□ 0.22
PTPRK-208ENST00000392449 ACP5P13686 325 aa16.44■□□□□ 0.22
PTPRK-208ENST00000392449 NOP2P46087 812 aaKnown RBP16.44■□□□□ 0.22
PTPRK-208ENST00000392449 RPL26P61254 145 aaKnown RBP16.44■□□□□ 0.22
PTPRK-208ENST00000392449 PCSK7Q16549 785 aa16.44■□□□□ 0.22
PTPRK-208ENST00000392449 SLC9A4Q6AI14 798 aa16.44■□□□□ 0.22
PTPRK-208ENST00000392449 ZNF605Q86T29 641 aa16.44■□□□□ 0.22
PTPRK-208ENST00000392449 NLRP8Q86W28 1048 aa16.44■□□□□ 0.22
PTPRK-208ENST00000392449 VSTM4Q8IW00 320 aa16.44■□□□□ 0.22
PTPRK-208ENST00000392449 RNF214Q8ND24 703 aa16.44■□□□□ 0.22
PTPRK-208ENST00000392449 TMEM159Q96B96 161 aa16.44■□□□□ 0.22
PTPRK-208ENST00000392449 MLPHQ9BV36 600 aaPredicted RBP16.44■□□□□ 0.22
PTPRK-208ENST00000392449 FAM83DQ9H4H8 585 aa16.44■□□□□ 0.22
PTPRK-208ENST00000392449 NHEJ1Q9H9Q4 299 aaPredicted RBP16.44■□□□□ 0.22
PTPRK-208ENST00000392449 TBC1D29Q9UFV1 150 aa16.44■□□□□ 0.22
PTPRK-208ENST00000392449 RPL26L1Q9UNX3 145 aaKnown RBP16.44■□□□□ 0.22
PTPRK-208ENST00000392449 SHOC2Q9UQ13 582 aa16.44■□□□□ 0.22
PTPRK-208ENST00000392449 COL6A6A6NMZ7 2263 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 PYCARD-AS1I3L0S3 204 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 APOL1O14791 398 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 GPR3P46089 330 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 PPM1FP49593 454 aaPredicted RBP16.43■□□□□ 0.22
PTPRK-208ENST00000392449 LIMK2P53671 638 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 CYP4F2P78329 520 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 NFATC2Q13469 925 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 RFX6Q8HWS3 928 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 SFRP1Q8N474 314 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 SPATA22Q8NHS9 363 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.43■□□□□ 0.22
PTPRK-208ENST00000392449 OLFM3Q96PB7 478 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 TRIB3Q96RU7 358 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 ZMYND15Q9H091 742 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 HAUS2Q9NVX0 235 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 ZNHIT6Q9NWK9 470 aaKnown RBP16.43■□□□□ 0.22
PTPRK-208ENST00000392449 PKD2L2Q9NZM6 624 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 SAE1Q9UBE0 346 aaPredicted RBP16.43■□□□□ 0.22
PTPRK-208ENST00000392449 DNPEPQ9ULA0 475 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 TENM4Q6N022 2769 aa16.43■□□□□ 0.22
PTPRK-208ENST00000392449 SNX2O60749 519 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 MT-CYBP00156 380 aaPredicted RBP16.42■□□□□ 0.22
PTPRK-208ENST00000392449 PYGLP06737 847 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 THRAP10827 490 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 LRP8Q14114 963 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 TRIM14Q14142 442 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 SNAP47Q5SQN1 464 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 DTX1Q86Y01 620 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 GPR26Q8NDV2 337 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 OR4D9Q8NGE8 314 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 ART4Q93070 314 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 IMP4Q96G21 291 aaKnown RBP16.42■□□□□ 0.22
PTPRK-208ENST00000392449 WBP1Q96G27 269 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 CCDC42Q96M95 316 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 SLC38A3Q99624 504 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 GOLPH3Q9H4A6 298 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 OCIAD1Q9NX40 245 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 UBP1Q9NZI7 540 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 VPS18Q9P253 973 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 ATXN10Q9UBB4 475 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 LCMT1Q9UIC8 334 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 A8MU76 341 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 HGSO14964 777 aaPredicted RBP16.42■□□□□ 0.22
PTPRK-208ENST00000392449 CBFA2T2O43439 604 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 ZNF8P17098 575 aaPredicted RBP16.42■□□□□ 0.22
PTPRK-208ENST00000392449 FASLGP48023 281 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 PLA2G4EQ3MJ16 856 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 LINC00303Q3SY05 128 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 MANEAQ5SRI9 462 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.42■□□□□ 0.22
PTPRK-208ENST00000392449 MFSD7Q6UXD7 560 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 EXD3Q8N9H8 876 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 CCHCR1Q8TD31 782 aa16.42■□□□□ 0.22
PTPRK-208ENST00000392449 EXTL1Q92935 676 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms