RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 FAM92BQ6ZTR7 304 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 TRPV1Q8NER1 839 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 DCAKDQ8WVC6 231 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 SEC14L1Q92503 715 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 TMEM159Q96B96 161 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 PPM1MQ96MI6 270 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 CSPG4P5Q96PW8 444 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 MDM4O15151 490 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 C8BP07358 591 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 UGT2B15P54855 530 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 PTPRNQ16849 979 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 PTCHD4Q6ZW05 846 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 SMG8Q8ND04 991 aaKnown RBP19.62■□□□□ 0.73
SHANK1-203ENST00000391813 EEF1AKMT1Q8WVE0 214 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 PHF11Q9UIL8 331 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 SPEF1Q9Y4P9 236 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 TBX1O43435 398 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 TSPAN3O60637 253 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 SCIMPQ6UWF3 145 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 PIGZQ86VD9 579 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 ARMC8Q8IUR7 673 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 FIBCD1Q8N539 461 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 OR8H1Q8NGG4 311 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 HASPINQ8TF76 798 aa19.62■□□□□ 0.73
SHANK1-203ENST00000391813 TEFMQ96QE5 360 aaKnown RBP19.62■□□□□ 0.73
SHANK1-203ENST00000391813 INTS10Q9NVR2 710 aaKnown RBP19.62■□□□□ 0.73
SHANK1-203ENST00000391813 AKAP7Q9P0M2 348 aaPredicted RBP19.62■□□□□ 0.73
SHANK1-203ENST00000391813 CACNA1FO60840 1977 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 GSAPA4D1B5 854 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 ITIH1P19827 911 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 NR4A1P22736 598 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 PHC1P78364 1004 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 SH3D19Q5HYK7 790 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 NAT8LQ8N9F0 302 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 FAM156AQ8NDB6 213 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 ATP13A1Q9HD20 1204 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 OGDHLQ9ULD0 1010 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 XRCC1P18887 633 aaPredicted RBP19.61■□□□□ 0.73
SHANK1-203ENST00000391813 CTSKP43235 329 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 TEX44Q53QW1 395 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 SFT2D3Q587I9 215 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 ABCC13Q9NSE7 274 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 SUCOQ9UBS9 1254 aaKnown RBP19.61■□□□□ 0.73
SHANK1-203ENST00000391813 PSMD11O00231 422 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 ELNP15502 786 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 SLC18A2Q05940 514 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 PABPC1LQ4VXU2 614 aaKnown RBP19.61■□□□□ 0.73
SHANK1-203ENST00000391813 FSTL4Q6MZW2 842 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 XYLT1Q86Y38 959 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 LRRC20Q8TCA0 184 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 TWIST2Q8WVJ9 160 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 DIRAS2Q96HU8 199 aa19.61■□□□□ 0.73
SHANK1-203ENST00000391813 ITM2AO43736 263 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 AP2A1O95782 977 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 MYL9P24844 172 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 ICAM3P32942 547 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 CD86P42081 329 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 SPIBQ01892 262 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 TGM3Q08188 693 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 TUBA3CQ13748 450 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 CERCAMQ5T4B2 595 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 CXXC5Q7LFL8 322 aaKnown RBP19.6■□□□□ 0.73
SHANK1-203ENST00000391813 RASSF1Q9NS23 344 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 COQ4Q9Y3A0 265 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 A6NHS1 94 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 UBXN8O00124 270 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 PGRMC2O15173 223 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 OR6B1O95007 311 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 CKMT2P17540 419 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 ALDH9A1P49189 494 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 CPXM1Q96SM3 734 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 MLPHQ9BV36 600 aaPredicted RBP19.6■□□□□ 0.73
SHANK1-203ENST00000391813 EI24O14681 340 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 GUCY1B2O75343 617 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 UNGP13051 313 aaPredicted RBP19.6■□□□□ 0.73
SHANK1-203ENST00000391813 TYMPP19971 482 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 POU5F1Q01860 360 aaKnown RBP19.6■□□□□ 0.73
SHANK1-203ENST00000391813 GBE1Q04446 702 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 GRM3Q14832 879 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 NOMO2Q5JPE7 1267 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 LCN1P1Q5VSP4 162 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 AHSA2Q719I0 299 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 CHMP1BQ7LBR1 199 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 ZNF557Q8N988 423 aaPredicted RBP19.6■□□□□ 0.73
SHANK1-203ENST00000391813 HDAC10Q969S8 669 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 C12orf43Q96C57 262 aaKnown RBP19.6■□□□□ 0.73
SHANK1-203ENST00000391813 ACO2Q99798 780 aaKnown RBP19.6■□□□□ 0.73
SHANK1-203ENST00000391813 SPATA5L1Q9BVQ7 753 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 NXF3Q9H4D5 531 aaKnown RBP19.6■□□□□ 0.73
SHANK1-203ENST00000391813 EIF2B3Q9NR50 452 aaKnown RBP19.6■□□□□ 0.73
SHANK1-203ENST00000391813 CNTN6Q9UQ52 1028 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 GIT1Q9Y2X7 761 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 A0A1W2PQ72 361 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 RPL9P32969 192 aaKnown RBP19.6■□□□□ 0.73
SHANK1-203ENST00000391813 CENPAP49450 140 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 GNA12Q03113 381 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 IFNL1Q8IU54 200 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 SLC34A3Q8N130 599 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 C10orf53Q8N6V4 93 aa19.6■□□□□ 0.73
SHANK1-203ENST00000391813 PLEKHO2Q8TD55 490 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms