RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 MPHOSPH8Q99549 860 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 OPRPNQ99935 248 aaPredicted RBP1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 CLSTN3Q9BQT9 956 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 PYGO2Q9BRQ0 406 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 ISCA1Q9BUE6 129 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 GPR63Q9BZJ6 419 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 TRIM15Q9C019 465 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 GFRA4Q9GZZ7 299 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 CSTL1Q9H114 145 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 WDR13Q9H1Z4 485 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 LRMDAQ9H2I8 198 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 ESRP2Q9H6T0 727 aaKnown RBP1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 RIC8AQ9NPQ8 531 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 ASAH2Q9NR71 780 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 SMC4Q9NTJ3 1288 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 KCND2Q9NZV8 630 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 MARCH4Q9P2E8 410 aaPredicted RBP1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 UBA2Q9UBT2 640 aaPredicted RBP1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 HAO1Q9UJM8 370 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 TINAGQ9UJW2 476 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 TBX20Q9UMR3 447 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 OR2W1Q9Y3N9 320 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 CEPT1Q9Y6K0 416 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 SCINQ9Y6U3 715 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 RNF215Q9Y6U7 377 aa1.26□□□□□ -2.21
SNORD28B-201ENST00000390993 SNED1Q8TER0 1413 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 A0A0J9YWU9 116 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ZCWPW2A0A1B0GU75 182 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 NDUFAF8A1L188 74 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 MEIOCA2RUB1 952 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 B9A039 149 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 EIF3DO15371 548 aaKnown RBP eCLIP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 KCNN4O15554 427 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 EXTL3O43909 919 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 URODP06132 367 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 FGF5P12034 268 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 HSD3B1P14060 373 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ABCD1P33897 745 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 UBA7P41226 1012 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 PRCPP42785 496 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 TRAPPC10P48553 1259 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 LUMP51884 338 aaPredicted RBP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 SLC8A3P57103 927 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 IRX6P78412 446 aaPredicted RBP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ZBED6P86452 979 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 TFAP4Q01664 338 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 TLE2Q04725 743 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 GRIK3Q13003 919 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 TRPC3Q13507 836 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 TDGQ13569 410 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 UGP2Q16851 508 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 GRAMD1BQ3KR37 738 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ZFP69Q49AA0 526 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ANKRD54Q6NXT1 300 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 FBXO46Q6PJ61 603 aaPredicted RBP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 RBMS3Q6XE24 437 aaKnown RBP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 SH2D5Q6ZV89 423 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 BBS12Q6ZW61 710 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 FASTKD5Q7L8L6 764 aaKnown RBP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 SH2D6Q7Z4S9 175 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 P2RY8Q86VZ1 359 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 DHX40Q8IX18 779 aaKnown RBP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 KLHDC9Q8NEP7 349 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 PPHLN1Q8NEY8 458 aaKnown RBP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 UTP15Q8TED0 518 aaKnown RBP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 SLC38A5Q8WUX1 472 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 GTF3C6Q969F1 213 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 RILPL2Q969X0 211 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ZNF524Q96C55 264 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ARHGEF26Q96DR7 871 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ART5Q96L15 291 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ZNF599Q96NL3 588 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 LITAFQ99732 161 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 HERPUD2Q9BSE4 406 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 MCRIP2Q9BUT9 160 aaKnown RBP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 PDCL3Q9H2J4 239 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 PDZD7Q9H5P4 517 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 SLC52A3Q9NQ40 469 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 DDX4Q9NQI0 724 aaKnown RBP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ACSS1Q9NUB1 689 aaPredicted RBP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 SLC38A7Q9NVC3 462 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ADPRHL2Q9NX46 363 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 ACSL5Q9ULC5 683 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 MAU2Q9Y6X3 613 aa1.25□□□□□ -2.21
SNORD28B-201ENST00000390993 A0A1W2PPI3 338 aa1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 A0A1W2PRG0 241 aa1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 KANSL1LA0AUZ9 987 aa1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 OR5K3A6NET4 321 aa1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 TAF4O00268 1085 aa1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 NR5A2O00482 541 aa1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 VCYO14598 125 aa1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 TCERG1O14776 1098 aaKnown RBP1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 CTSVO60911 334 aa1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 GPC4O75487 556 aa1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 SLC25A12O75746 678 aa1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 LDHAP00338 332 aaKnown RBP1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 HMBSP08397 361 aa1.24□□□□□ -2.21
SNORD28B-201ENST00000390993 PATE4P0C8F1 98 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms