RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 ZNF704Q6ZNC4 412 aaPredicted RBP-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 UNC13DQ70J99 1090 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 MKXQ8IYA7 352 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 KLHDC1Q8N7A1 406 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 UBR7Q8N806 425 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 RTL3Q8N8U3 475 aaKnown RBP-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 AQP11Q8NBQ7 271 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 OR2AK2Q8NG84 335 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 OR10G8Q8NGN5 311 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 WDR66Q8TBY9 1149 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 CLEC4CQ8WTT0 213 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 NPRL2Q8WTW4 380 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 IPCEF1Q8WWN9 437 aaPredicted RBP-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 OTULINQ96BN8 352 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 PCYT2Q99447 389 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 RHNO1Q9BSD3 238 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 DGCR6LQ9BY27 220 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 VEZTQ9HBM0 779 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 SLC22A11Q9NSA0 550 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 SACM1LQ9NTJ5 587 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 NDE1Q9NXR1 346 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 SLC12A4Q9UP95 1085 aa-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 CARHSP1Q9Y2V2 147 aaKnown RBP-0.53□□□□□ -2.49
TRAJ53-201ENST00000390485 SLIT3O75094 1523 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 USP19O94966 1318 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 COL5A3P25940 1745 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 A0A087WZ62 844 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 ARPC4-TTLL3A0A0A6YYG9 625 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 H0YIN7 160 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 PLK4O00444 970 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 TGFB1I1O43294 461 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 COQ9O75208 318 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 RGS11O94810 467 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 SEC31AO94979 1220 aaKnown RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 CYP2A7P20853 494 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 IBSPP21815 317 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 RRM1P23921 792 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 CD34P28906 385 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 SLC7A1P30825 629 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 GRK5P34947 590 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 GTF2F1P35269 517 aaKnown RBP eCLIP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 SUMO3P55854 103 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 RPS16P62249 146 aaKnown RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 MBTD1Q05BQ5 628 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 ILF2Q12905 390 aaKnown RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 NR1D2Q14995 579 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 MYLK3Q32MK0 819 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 C3orf38Q5JPI3 329 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 TTI2Q6NXR4 508 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 REG3GQ6UW15 175 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 CHST15Q7LFX5 561 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 RNF144BQ7Z419 303 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 CATIPQ7Z7H3 387 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 MMAAQ8IVH4 418 aaKnown RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 EID3Q8N140 333 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 RBM15BQ8NDT2 890 aaKnown RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 RASSF8Q8NHQ8 419 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 AFAP1L1Q8TED9 768 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 C2CD4CQ8TF44 421 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 ELSPBP1Q96BH3 223 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 CEP295NLQ96MC4 621 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 MTERF1Q99551 399 aaKnown RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 HDHD5Q9BXW7 423 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 CADM1Q9BY67 442 aaKnown RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 TKTL2Q9H0I9 626 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 FZD8Q9H461 694 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 PLSCR3Q9NRY6 295 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 SPATS2LQ9NUQ6 558 aaKnown RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 TEX10Q9NXF1 929 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 MARCH4Q9P2E8 410 aaPredicted RBP-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 NDRG3Q9UGV2 375 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 ITGB1BP2Q9UKP3 347 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 PCDHGB5Q9Y5G0 923 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 WIF1Q9Y5W5 379 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 ZNF407Q9C0G0 2248 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 COL7A1Q02388 2944 aa-0.54□□□□□ -2.5
TRAJ53-201ENST00000390485 LAMB2P55268 1798 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 PHLDB1Q86UU1 1377 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 PTPRCP08575 1304 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 ARHGAP21Q5T5U3 1957 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 NCAM2O15394 837 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 ZNF861PO60384 105 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 IGSF3O75054 1194 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 SLITRK3O94933 977 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 TFPIP10646 304 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 TCF3P15923 654 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 CD58P19256 250 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 PRKACGP22612 351 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 CAPGP40121 348 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 LEPRP48357 1165 aaKnown RBP-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 ZNF136P52737 540 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 CTSCP53634 463 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 PFN3P60673 137 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 BRDTQ58F21 947 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 CYP4A22Q5TCH4 519 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 FAXCQ5TGI0 409 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 ANKRD40Q6AI12 368 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 MRNIPQ6NTE8 343 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 ARMCX5Q6P1M9 558 aa-0.55□□□□□ -2.5
TRAJ53-201ENST00000390485 KLHL17Q6TDP4 642 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms