RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 EXO1Q9UQ84 846 aaKnown RBP0.8□□□□□ -2.28
SNORA40-201ENST00000388090 COL4A3BPQ9Y5P4 624 aa0.8□□□□□ -2.28
SNORA40-201ENST00000388090 FAM90A20PA6NIJ5 464 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 ACOD1A6NK06 481 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 H0Y9J4 135 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 CDX4O14627 284 aaPredicted RBP0.79□□□□□ -2.28
SNORA40-201ENST00000388090 TNPO2O14787 897 aaKnown RBP0.79□□□□□ -2.28
SNORA40-201ENST00000388090 PQBP1O60828 265 aaKnown RBP0.79□□□□□ -2.28
SNORA40-201ENST00000388090 FOXH1O75593 365 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 PTPN2P17706 415 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 DDX5P17844 614 aaKnown RBP0.79□□□□□ -2.28
SNORA40-201ENST00000388090 IL4RP24394 825 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 PNPLA4P41247 253 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 NKX2-1P43699 371 aaPredicted RBP0.79□□□□□ -2.28
SNORA40-201ENST00000388090 CLDN2P57739 230 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 LY6DQ14210 128 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 ARHGEF16Q5VV41 709 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 ZNF280DQ6N043 979 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 IL20RBQ6UXL0 311 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 SYNE3Q6ZMZ3 975 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 MAGEB6Q8N7X4 407 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 ACVR1CQ8NER5 493 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 HMGCLL1Q8TB92 370 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 MIPOL1Q8TD10 442 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 HSPH1Q92598 858 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 ZC3HAV1LQ96H79 300 aaKnown RBP0.79□□□□□ -2.28
SNORA40-201ENST00000388090 ZNF570Q96NI8 536 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 SH3GL2Q99962 352 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 MXRA8Q9BRK3 442 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 CTDSP1Q9GZU7 261 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 MUTYHQ9UIF7 546 aa0.79□□□□□ -2.28
SNORA40-201ENST00000388090 A0A087WUV0 522 aaPredicted RBP0.78□□□□□ -2.28
SNORA40-201ENST00000388090 C17orf113A0A1B0GUU1 675 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 FFAR2O15552 330 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 NCK2O43639 380 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 C22orf31O95567 290 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 CLDN1O95832 211 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 ITGA2BP08514 1039 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 HOXC4P09017 264 aaPredicted RBP0.78□□□□□ -2.28
SNORA40-201ENST00000388090 CSF1P09603 554 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 PCNAP12004 261 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 ETFAP13804 333 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 AGAP20933 346 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 PIK3R1P27986 724 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 SERPINA4P29622 427 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 METAP2P50579 478 aaKnown RBP eCLIP0.78□□□□□ -2.28
SNORA40-201ENST00000388090 GSCP56915 257 aaPredicted RBP0.78□□□□□ -2.28
SNORA40-201ENST00000388090 ACVR2BQ13705 512 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 HNRNPDQ14103 355 aaKnown RBP0.78□□□□□ -2.28
SNORA40-201ENST00000388090 TEAD2Q15562 447 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 SLC18A3Q16572 532 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 SGO1Q5FBB7 561 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 NXNQ6DKJ4 435 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 PLXDC2Q6UX71 529 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 PLEKHM3Q6ZWE6 761 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 GATAD2AQ86YP4 633 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 ZBED8Q8IZ13 594 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 C11orf42Q8N5U0 333 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 RHBDF1Q96CC6 855 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 MAGED4Q96JG8 741 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 SDHCQ99643 169 aaPredicted RBP0.78□□□□□ -2.28
SNORA40-201ENST00000388090 NPLQ9BXD5 320 aaPredicted RBP0.78□□□□□ -2.28
SNORA40-201ENST00000388090 CLEC7AQ9BXN2 247 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 BRD8Q9H0E9 1235 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 PPP1R3EQ9H7J1 279 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 TCP11L1Q9NUJ3 509 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 TMLHEQ9NVH6 421 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 C19orf53Q9UNZ5 99 aaPredicted RBP0.78□□□□□ -2.28
SNORA40-201ENST00000388090 VSIG4Q9Y279 399 aa0.78□□□□□ -2.28
SNORA40-201ENST00000388090 FBN1P35555 2871 aaKnown RBP0.78□□□□□ -2.29
SNORA40-201ENST00000388090 MYH15Q9Y2K3 1946 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 H0YIN7 160 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 IDH3BO43837 385 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 GPRIN2O60269 458 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 SYNCRIPO60506 623 aaKnown RBP0.77□□□□□ -2.29
SNORA40-201ENST00000388090 PLA2G6O60733 806 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 MCCP23508 829 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 HNF1BP35680 557 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 ZFP36L2P47974 494 aaKnown RBP0.77□□□□□ -2.29
SNORA40-201ENST00000388090 KRTAP12-4P60329 112 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 PDCLQ13371 301 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 C2orf68Q2NKX9 166 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 SLC45A4Q5BKX6 768 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 ATPAF1Q5TC12 328 aaPredicted RBP0.77□□□□□ -2.29
SNORA40-201ENST00000388090 NSUN5P2Q63ZY6 315 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 LRRC8EQ6NSJ5 796 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 DUS1LQ6P1R4 473 aaKnown RBP0.77□□□□□ -2.29
SNORA40-201ENST00000388090 PSRC1Q6PGN9 363 aaPredicted RBP0.77□□□□□ -2.29
SNORA40-201ENST00000388090 RAB11FIP2Q7L804 512 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 LINGO2Q7L985 606 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 CEACAM19Q7Z692 300 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 ISCA2Q86U28 154 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 TCEAL8Q8IYN2 117 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 SPATA6LQ8N4H0 392 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 DCLK2Q8N568 766 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 Q8NBF4 154 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 TMEM178AQ8NBL3 297 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 BEST2Q8NFU1 509 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 FBXL8Q96CD0 374 aa0.77□□□□□ -2.29
SNORA40-201ENST00000388090 GAL3ST4Q96RP7 486 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms