RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 PDE4DIPQ5VU43 2346 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-202ENST00000379996 H2AFYO75367 372 aaKnown RBP7.72□□□□□ -1.17
CDKL5-202ENST00000379996 ZMPSTE24O75844 475 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 CYP17A1P05093 508 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 JUNP05412 331 aaKnown RBP7.72□□□□□ -1.17
CDKL5-202ENST00000379996 CPA3P15088 417 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 CSNK1DP48730 415 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 SESN3P58005 492 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 IRX1P78414 480 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-202ENST00000379996 GNA12Q03113 381 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 KLF10Q13118 480 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 ZNF177Q13360 481 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-202ENST00000379996 PEX6Q13608 980 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 ITGA9Q13797 1035 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 ANO4Q32M45 955 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 INO80DQ53TQ3 878 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-202ENST00000379996 TMEM214Q6NUQ4 689 aaKnown RBP7.72□□□□□ -1.17
CDKL5-202ENST00000379996 IZUMO2Q6UXV1 221 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 CPA6Q8N4T0 437 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 POU5F2Q8N7G0 328 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 KDF1Q8NAX2 398 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-202ENST00000379996 JADE3Q92613 823 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 ACDQ96AP0 544 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 TEKT5Q96M29 485 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 CAB39LQ9H9S4 337 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 HPS4Q9NQG7 708 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 RIMS3Q9UJD0 308 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 SARDHQ9UL12 918 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 RPS6KL1Q9Y6S9 549 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 DOCK6Q96HP0 2047 aa7.72□□□□□ -1.17
CDKL5-202ENST00000379996 RAMP2O60895 175 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 TBL1XO60907 577 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 CSPG5O95196 566 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 IRF1P10914 325 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 COX4I1P13073 169 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 CES1P23141 567 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 NMBRP28336 390 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 AP2B1P63010 937 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 SULT2A1Q06520 285 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 DHCR24Q15392 516 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 CERCAMQ5T4B2 595 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 TANGO2Q6ICL3 276 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 CHSY3Q70JA7 882 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 SLC25A41Q8N5S1 370 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 CDKL2Q92772 493 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 ISG20Q96AZ6 181 aaKnown RBP7.71□□□□□ -1.17
CDKL5-202ENST00000379996 FERMT1Q9BQL6 677 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 GATA5Q9BWX5 397 aaPredicted RBP7.71□□□□□ -1.17
CDKL5-202ENST00000379996 CEP44Q9C0F1 390 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 SIK2Q9H0K1 926 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 SMG9Q9H0W8 520 aaKnown RBP7.71□□□□□ -1.17
CDKL5-202ENST00000379996 DLGAP2Q9P1A6 1054 aa7.71□□□□□ -1.17
CDKL5-202ENST00000379996 ACOT8O14734 319 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 NEBLO76041 1014 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 C2P06681 752 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 CHRNGP07510 517 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 ADH5P11766 374 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 OR1E1P30953 314 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 CCR10P46092 362 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 PTK2BQ14289 1009 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 HERC3Q15034 1050 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 RWDD4Q6NW29 188 aaKnown RBP7.71□□□□□ -1.18
CDKL5-202ENST00000379996 CYHR1Q6ZMK1 362 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 STRA8Q7Z7C7 330 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 TMEM126BQ8IUX1 230 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 AHI1Q8N157 1196 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 GALNT15Q8N3T1 639 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 ASIC4Q96FT7 647 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 NDFIP2Q9NV92 336 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 MPP6Q9NZW5 540 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 ANKRD6Q9Y2G4 727 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 A0A096LPK6 155 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 KCNK1O00180 336 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 NPC1O15118 1278 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 TIMM44O43615 452 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 ASLP04424 464 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 PEX2P28328 305 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 NPY2RP49146 381 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 PAPOLAP51003 745 aaKnown RBP7.71□□□□□ -1.18
CDKL5-202ENST00000379996 AQP4P55087 323 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 IHHQ14623 411 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 GRM3Q14832 879 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 POLD3Q15054 466 aaPredicted RBP7.71□□□□□ -1.18
CDKL5-202ENST00000379996 EIF4HQ15056 248 aaKnown RBP7.71□□□□□ -1.18
CDKL5-202ENST00000379996 HPS6Q86YV9 775 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 MOCOSQ96EN8 888 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 VPS39Q96JC1 886 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 PLA2G2FQ9BZM2 168 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 EPB41L1Q9H4G0 881 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 CHRAC1Q9NRG0 131 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 HS3ST2Q9Y278 367 aa7.71□□□□□ -1.18
CDKL5-202ENST00000379996 PRSS51A0A1B0GVH4 220 aa7.7□□□□□ -1.18
CDKL5-202ENST00000379996 MAGEB16A2A368 324 aa7.7□□□□□ -1.18
CDKL5-202ENST00000379996 DENRO43583 198 aaKnown RBP7.7□□□□□ -1.18
CDKL5-202ENST00000379996 USP12O75317 370 aa7.7□□□□□ -1.18
CDKL5-202ENST00000379996 SRPRAP08240 638 aaKnown RBP7.7□□□□□ -1.18
CDKL5-202ENST00000379996 NEFHP12036 1026 aa7.7□□□□□ -1.18
CDKL5-202ENST00000379996 NFKB1P19838 968 aa7.7□□□□□ -1.18
CDKL5-202ENST00000379996 RPS24P62847 133 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms