RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CHRM3P20309 590 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 ETV3P41162 512 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 MNX1P50219 401 aaPredicted RBP10.78□□□□□ -0.68
NEDD9-201ENST00000379433 GNA13Q14344 377 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 PPM1LQ5SGD2 360 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 ERAP2Q6P179 960 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 TIFABQ6ZNK6 161 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 GAREM2Q75VX8 874 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 TCEAL4Q96EI5 215 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 SLC45A3Q96JT2 553 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 C7orf26Q96N11 449 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 MOGAT1Q96PD6 335 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 TCF25Q9BQ70 676 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 DENND2DQ9H6A0 471 aaPredicted RBP10.78□□□□□ -0.68
NEDD9-201ENST00000379433 CAPN10Q9HC96 672 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 PFDN4Q9NQP4 134 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 SEPT3Q9UH03 358 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 FKBPLQ9UIM3 349 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 MOSPD1Q9UJG1 213 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 LAMP5Q9UJQ1 280 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 VWA7Q9Y334 891 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 CFAP73A6NFT4 308 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 GM2AP17900 193 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 EVI2BP34910 448 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 KCNC1P48547 511 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 IDH3AP50213 366 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 BLVRAP53004 296 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 PFKFB4Q16877 469 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 CCDC153Q494R4 210 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 SMYD5Q6GMV2 418 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 SCIMPQ6UWF3 145 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 CACUL1Q86Y37 369 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 CILP2Q8IUL8 1156 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 SLC39A11Q8N1S5 342 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 TXNDC5Q8NBS9 432 aaKnown RBP10.78□□□□□ -0.68
NEDD9-201ENST00000379433 MRPS31Q92665 395 aaKnown RBP10.78□□□□□ -0.68
NEDD9-201ENST00000379433 VWCEQ96DN2 955 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 RAB3IPQ96QF0 476 aaPredicted RBP10.78□□□□□ -0.68
NEDD9-201ENST00000379433 HBEGFQ99075 208 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 TMEM175Q9BSA9 504 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 FAM167BQ9BTA0 163 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 GPR63Q9BZJ6 419 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 KCNK4Q9NYG8 393 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 GIMAP2Q9UG22 337 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 TBX21Q9UL17 535 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 ANGPTL3Q9Y5C1 460 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 PCDHB12Q9Y5F1 795 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 PTGDR2Q9Y5Y4 395 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 LDB2O43679 373 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 CCDC22O60826 627 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 SIN3BO75182 1162 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 NDUFS3O75489 264 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 SRP72O76094 671 aaKnown RBP10.77□□□□□ -0.69
NEDD9-201ENST00000379433 RHOBTB1O94844 696 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 MPOP05164 745 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 ATXN1LP0C7T5 689 aaKnown RBP10.77□□□□□ -0.69
NEDD9-201ENST00000379433 GFAPP14136 432 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 PRKACBP22694 351 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 PTPN4P29074 926 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 ASPHQ12797 758 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 CTC1Q2NKJ3 1217 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 TCHHL1Q5QJ38 904 aaPredicted RBP10.77□□□□□ -0.69
NEDD9-201ENST00000379433 SLC2A7Q6PXP3 512 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 LAYNQ6UX15 382 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 FAM151BQ6UXP7 276 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 WDR60Q8WVS4 1066 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 ILKAPQ9H0C8 392 aaPredicted RBP10.77□□□□□ -0.69
NEDD9-201ENST00000379433 DDX18Q9NVP1 670 aaKnown RBP10.77□□□□□ -0.69
NEDD9-201ENST00000379433 BRWD1Q9NSI6 2320 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 A0A1B0GVM2 712 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 A0A1W2PQ67 120 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 TCAF2A6NFQ2 919 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 SPECC1L-ADORA2AF8WAN1 911 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 BIRC5O15392 142 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 STX7O15400 261 aaKnown RBP10.77□□□□□ -0.69
NEDD9-201ENST00000379433 SNNO75324 88 aaPredicted RBP10.77□□□□□ -0.69
NEDD9-201ENST00000379433 UBL4AP11441 157 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 CDH4P55283 916 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 DSTNP60981 165 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 KLC1Q07866 573 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 FAM83EQ2M2I3 478 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 TRIM67Q6ZTA4 783 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 ASRGL1Q7L266 308 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 ANKRD33Q7Z3H0 272 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 CRIPAKQ8N1N5 446 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 MDGA1Q8NFP4 955 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 GRIN3AQ8TCU5 1115 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 SKA2Q8WVK7 121 aaPredicted RBP10.77□□□□□ -0.69
NEDD9-201ENST00000379433 SORCS1Q8WY21 1168 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 TTC1Q99614 292 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 TREX1Q9NSU2 369 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 NCKIPSDQ9NZQ3 722 aa10.77□□□□□ -0.69
NEDD9-201ENST00000379433 EIF2B4Q9UI10 523 aaKnown RBP10.77□□□□□ -0.69
NEDD9-201ENST00000379433 IGLV3-10A0A075B6K4 115 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 FAM92AA1XBS5 289 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 GRXCR1A8MXD5 290 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 CLDN11O75508 207 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 DNAJB1P25685 340 aa10.76□□□□□ -0.69
NEDD9-201ENST00000379433 CTSOP43234 321 aaPredicted RBP10.76□□□□□ -0.69
NEDD9-201ENST00000379433 ERVFC1P60507 584 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms