RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SLC22A12Q96S37 553 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 ATOH8Q96SQ7 321 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 CYP2S1Q96SQ9 504 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 MTIF3Q9H2K0 278 aaKnown RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 ZBTB26Q9HCK0 441 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 CYP4F12Q9HCS2 524 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 KIAA1522Q9P206 1035 aaPredicted RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 BCAP29Q9UHQ4 241 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 CDH22Q9UJ99 828 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 ZNF711Q9Y462 761 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PTPRSQ13332 1948 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 ZNF106Q9H2Y7 1883 aaKnown RBP10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 LOC100653049A0A140TA62 436 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 STX16-NPEPL1H3BU86 382 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 STX16O14662 325 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 TGM5O43548 720 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 KRT34O76011 436 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 FGF18O76093 207 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 SUPT7LO94864 414 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 PGLSO95336 258 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 IGSF6O95976 241 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 ESR1P03372 595 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 CKMP06732 381 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 FGF4P08620 206 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 HNRNPLP14866 589 aaKnown RBP eCLIP10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 DDX6P26196 483 aaKnown RBP eCLIP10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 FMO4P31512 558 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 HMGCLP35914 325 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 ABL2P42684 1182 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 PLK1P53350 603 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 CDC16Q13042 620 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 TAF11Q15544 211 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 UNC50Q53HI1 259 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 TXNDC11Q6PKC3 985 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 LINGO4Q6UY18 593 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 RTL10Q7L3V2 364 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 SNX32Q86XE0 403 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 TMC8Q8IU68 726 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 CLYBLQ8N0X4 340 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 FBXW8Q8N3Y1 598 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 FIBCD1Q8N539 461 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 EFHBQ8N7U6 833 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 PTGR2Q8N8N7 351 aaPredicted RBP10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 ZNF557Q8N988 423 aaPredicted RBP10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 FIBINQ8TAL6 211 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 DDI1Q8WTU0 396 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 KCNJ9Q92806 393 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 HLA-CQ95604 372 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 PHF21BQ96EK2 531 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 CATSPER2Q96P56 530 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 TTC1Q99614 292 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 LRRC3Q9BY71 257 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 SHCBP1LQ9BZQ2 653 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 IL17CQ9P0M4 197 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 FKBPLQ9UIM3 349 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 TRMT6Q9UJA5 497 aaKnown RBP10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 TRAF6Q9Y4K3 522 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 PCDHB1Q9Y5F3 818 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 SLC30A1Q9Y6M5 507 aa10.42□□□□□ -0.74
POLR2J3-201ENST00000379340 SOBPA7XYQ1 873 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 UBDO15205 165 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 CYBBP04839 570 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 CNPP09543 421 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 ACADSP16219 412 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 RPS3P23396 243 aaKnown RBP eCLIP10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 MTTPP55157 894 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 HTRA4P83105 476 aaPredicted RBP10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 CYP4F8P98187 520 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 BCL2L1Q07817 233 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 STX5Q13190 355 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 PEX6Q13608 980 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 PTPRNQ16849 979 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 ZRANB3Q5FWF4 1079 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 LYPLAL1Q5VWZ2 237 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 LILRA6Q6PI73 481 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 LRRC74BQ6ZQY2 392 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 GAREM2Q75VX8 874 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 EFL1Q7Z2Z2 1120 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 PGAM4Q8N0Y7 254 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 KCNV2Q8TDN2 545 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 MOCOSQ96EN8 888 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 CLPTM1LQ96KA5 538 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 BIRC8Q96P09 236 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 C1QTNF3Q9BXJ4 246 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 OSBPL1AQ9BXW6 950 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 EMILIN2Q9BXX0 1053 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 GPR63Q9BZJ6 419 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 EFCAB1Q9HAE3 211 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 MRPL40Q9NQ50 206 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 ACSS2Q9NR19 701 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 ASAH2Q9NR71 780 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 ABCB8Q9NUT2 735 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 UTP6Q9NYH9 597 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 CFAP97Q9P2B7 532 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 RNF112Q9ULX5 631 aa10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 FCF1Q9Y324 198 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 COPG1Q9Y678 874 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-201ENST00000379340 TMEM233B4DJY2 109 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 SUPT3HB4E1H0 165 aa10.4□□□□□ -0.74
POLR2J3-201ENST00000379340 NVLO15381 856 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms