RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 COPAP53621 1224 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 RPS14P62263 151 aaKnown RBP24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 HHATQ5VTY9 493 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 ZNF765Q7L2R6 523 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 SERPINA9Q86WD7 417 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 SYNPOQ8N3V7 929 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 TRAM1L1Q8N609 369 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 MGARPQ8TDB4 240 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 CXorf40AQ8TE69 158 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 FAM96AQ9H5X1 160 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 PSD3Q9NYI0 1048 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 ACOT9Q9Y305 439 aa24.41■■□□□ 1.5
ECHDC3-201ENST00000379215 H3BMM5 538 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 TSPAN6O43657 245 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 SHOX2O60902 331 aaPredicted RBP24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 DNTTP04053 509 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 C7P10643 843 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 CD9P21926 228 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 RPS3P23396 243 aaKnown RBP eCLIP24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 SLC26A3P40879 764 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 KPNA2P52292 529 aaKnown RBP24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 TAS2R39P59534 338 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 ZP2Q05996 745 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 LRRC32Q14392 662 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 ACOX1Q15067 660 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 TTC31Q49AM3 519 aaPredicted RBP24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 RBM20Q5T481 1227 aaKnown RBP24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 PIP5KL1Q5T9C9 394 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 TECPR1Q7Z6L1 1165 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 NXPE1Q8N323 547 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 ATXN2LQ8WWM7 1075 aaKnown RBP24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 SHDQ96IW2 340 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 NDNQ99608 321 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 FADS3Q9Y5Q0 445 aa24.4■■□□□ 1.5
ECHDC3-201ENST00000379215 A0A1W2PQF6 199 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 PRMT5O14744 637 aaPredicted RBP24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 SPINT1O43278 529 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 PRSS56P0CW18 603 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 FDXRP22570 491 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 DRD3P35462 400 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 CDKN1CP49918 316 aaPredicted RBP24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 GNGT1P63211 74 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 CREB5Q02930 508 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 DBN1Q16643 649 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 RPLP0P6Q8NHW5 317 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 COQ10AQ96MF6 247 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 SPATA16Q9BXB7 569 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 CLPBQ9H078 707 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 CCDC134Q9H6E4 229 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 ARHGEF3Q9NR81 526 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 ITM2BQ9Y287 266 aa24.39■■□□□ 1.5
ECHDC3-201ENST00000379215 SHISA7A6NL88 538 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 SRRM3A6NNA2 597 aaPredicted RBP24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 ASMTLO95671 621 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 PYGLP06737 847 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 PKMP14618 531 aaKnown RBP24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 ETV3P41162 512 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 TSNAXIP1Q2TAA8 658 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 CCDC153Q494R4 210 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 HENMT1Q5T8I9 393 aaKnown RBP24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 IER5LQ5T953 404 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 KIAA1211LQ6NV74 962 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 LVRNQ6Q4G3 990 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 Q6ZVL8 140 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 MICALCLQ6ZW33 695 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 CLEC14AQ86T13 490 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 TBC1D1Q86TI0 1168 aaPredicted RBP24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 TAX1BP1Q86VP1 789 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 HDDC3Q8N4P3 179 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 AADATQ8N5Z0 425 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 ACVR1CQ8NER5 493 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 HEXDCQ8WVB3 486 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 DTD2Q96FN9 168 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 WRAP53Q9BUR4 548 aaKnown RBP24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 TAS2R13Q9NYV9 303 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 THEGQ9P2T0 379 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 WNT16Q9UBV4 365 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 GNPTGQ9UJJ9 305 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 MMP17Q9ULZ9 603 aa24.39■■□□□ 1.49
ECHDC3-201ENST00000379215 APOA4P06727 396 aa24.38■■□□□ 1.49
ECHDC3-201ENST00000379215 SLC35E2BP0CK96 405 aa24.38■■□□□ 1.49
ECHDC3-201ENST00000379215 GABPB1Q06547 395 aaPredicted RBP24.38■■□□□ 1.49
ECHDC3-201ENST00000379215 PPM1JQ5JR12 505 aa24.38■■□□□ 1.49
ECHDC3-201ENST00000379215 AGBL4Q5VU57 503 aa24.38■■□□□ 1.49
ECHDC3-201ENST00000379215 ZNF549Q6P9A3 640 aa24.38■■□□□ 1.49
ECHDC3-201ENST00000379215 NLRP8Q86W28 1048 aa24.38■■□□□ 1.49
ECHDC3-201ENST00000379215 TMPRSS6Q8IU80 811 aa24.38■■□□□ 1.49
ECHDC3-201ENST00000379215 KCNJ9Q92806 393 aa24.38■■□□□ 1.49
ECHDC3-201ENST00000379215 COPS8Q99627 209 aa24.38■■□□□ 1.49
ECHDC3-201ENST00000379215 ZDHHC3Q9NYG2 299 aa24.38■■□□□ 1.49
ECHDC3-201ENST00000379215 MID2Q9UJV3 735 aa24.38■■□□□ 1.49
ECHDC3-201ENST00000379215 F8W8V4 182 aa24.37■■□□□ 1.49
ECHDC3-201ENST00000379215 PHGDHO43175 533 aaKnown RBP24.37■■□□□ 1.49
ECHDC3-201ENST00000379215 LZTS3O60299 673 aaPredicted RBP24.37■■□□□ 1.49
ECHDC3-201ENST00000379215 VPS26AO75436 327 aa24.37■■□□□ 1.49
ECHDC3-201ENST00000379215 FMO4P31512 558 aa24.37■■□□□ 1.49
ECHDC3-201ENST00000379215 NSG1P42857 185 aa24.37■■□□□ 1.49
ECHDC3-201ENST00000379215 ATP13A5Q4VNC0 1218 aa24.37■■□□□ 1.49
ECHDC3-201ENST00000379215 UGT3A1Q6NUS8 523 aa24.37■■□□□ 1.49
ECHDC3-201ENST00000379215 CDHR3Q6ZTQ4 885 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms