RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 LEF1Q9UJU2 399 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 MAPRE3Q9UPY8 281 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 SNAP91O60641 907 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 CYP7B1O75881 506 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 KCNH1O95259 989 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 NTRK1P04629 796 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 SKP1P63208 163 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 SEMA5AQ13591 1074 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 MZT2BQ6NZ67 158 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 DSELQ8IZU8 1212 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 CENPIQ92674 756 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-201ENST00000378156 TBATAQ96M53 351 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 PSME2Q9UL46 239 aa14.98□□□□□ -0.01
NPHP4-201ENST00000378156 A0A088AWK7 358 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 CCL22O00626 93 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 RECQL5O94762 991 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 ZNF10P21506 573 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 JAK1P23458 1154 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 ZNF792Q3KQV3 632 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 CDCA2Q69YH5 1023 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 PRSS55Q6UWB4 352 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 ABRAXAS1Q6UWZ7 409 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 LINGO4Q6UY18 593 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 CLEC20AQ6ZU45 233 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 CHMP1BQ7LBR1 199 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 FBXO30Q8TB52 745 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 ARMC7Q9H6L4 198 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 PSMD13Q9UNM6 376 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 CCL16O15467 120 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 UQCRBP14927 111 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 NDST2P52849 883 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 NR1D2Q14995 579 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 ESRP1Q6NXG1 681 aaKnown RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 ZCCHC8Q6NZY4 707 aaKnown RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 ZNF605Q86T29 641 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 ZNF513Q8N8E2 541 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 STYXQ8WUJ0 223 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 TIFAQ96CG3 184 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 DPPA5A6NC42 116 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 STX11O75558 287 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 CCT3P49368 545 aaKnown RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 IDH3AP50213 366 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 PRKD1Q15139 912 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 HECTD2Q5U5R9 776 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 CYP20A1Q6UW02 462 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 NANOGNBQ7Z5D8 188 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 TMEM110Q86TL2 294 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 SCLYQ96I15 445 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 PNPLA3Q9NST1 481 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 ENTPD4Q9Y227 616 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 TELO2Q9Y4R8 837 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 STYXL1Q9Y6J8 313 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 A0A0U1RQF3 1178 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 PABPC1P11940 636 aaKnown RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 MYL12AP19105 171 aa14.97□□□□□ -0.01
NPHP4-201ENST00000378156 RPL38P63173 70 aaKnown RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 KLF1Q13351 362 aaPredicted RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 C2orf15Q8WU43 125 aaKnown RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 POP5Q969H6 163 aaKnown RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 PTCD3Q96EY7 689 aaKnown RBP14.97□□□□□ -0.01
NPHP4-201ENST00000378156 F2P00734 622 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 F7P08709 466 aaPredicted RBP14.96□□□□□ -0.01
NPHP4-201ENST00000378156 CCNA2P20248 432 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 RALGDSQ12967 914 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 PPIGQ13427 754 aaKnown RBP eCLIP14.96□□□□□ -0.011e-6■■■□□ 16
NPHP4-201ENST00000378156 BLMHQ13867 455 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 ZNF460Q14592 562 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 SYPL2Q5VXT5 272 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 CERS6Q6ZMG9 384 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 AADATQ8N5Z0 425 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 OSBPL11Q9BXB4 747 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 BRD9Q9H8M2 597 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 SIX4Q9UIU6 781 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 TNFRSF21O75509 655 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 ALOX5P09917 674 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 GSSP48637 474 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 KCNJ11Q14654 390 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 ZIK1Q3SY52 487 aaPredicted RBP14.96□□□□□ -0.01
NPHP4-201ENST00000378156 XKR6Q5GH73 641 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 KIAA0408Q6ZU52 694 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 KRT74Q7RTS7 529 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 ARL14EPQ8N8R7 260 aaPredicted RBP14.96□□□□□ -0.01
NPHP4-201ENST00000378156 HMCESQ96FZ2 354 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 PCDHGC4Q9Y5F7 938 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 CPQQ9Y646 472 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 ZFP37Q9Y6Q3 630 aaPredicted RBP14.96□□□□□ -0.01
NPHP4-201ENST00000378156 METTL21CQ5VZV1 264 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 GDF6Q6KF10 455 aaPredicted RBP14.96□□□□□ -0.01
NPHP4-201ENST00000378156 DENND6AQ8IWF6 608 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 RGL4Q8IZJ4 473 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 CDK20Q8IZL9 346 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 HEXDCQ8WVB3 486 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 CAPSLQ8WWF8 208 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 TEKT5Q96M29 485 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 RIBC2Q9H4K1 309 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 ASF1AQ9Y294 204 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 TCAF1Q9Y4C2 921 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 PCDHB1Q9Y5F3 818 aa14.96□□□□□ -0.01
NPHP4-201ENST00000378156 IPO13O94829 963 aaKnown RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms