RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 C16orf96A6NNT2 1141 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 AZIN1O14977 448 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 PRKACGP22612 351 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 ALDH3A2P51648 485 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 UFM1P61960 85 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 CTF1Q16619 201 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 C6orf141Q5SZD1 244 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 DENND5AQ6IQ26 1287 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 PLEKHG7Q6ZR37 379 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 SAPCD2Q86UD0 394 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 LGI2Q8N0V4 545 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 PTERQ96BW5 349 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 VTA1Q9NP79 307 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 SEMA4BQ9NPR2 832 aaPredicted RBP15.8■□□□□ 0.12
CKAP4-201ENST00000378026 HOXC10Q9NYD6 342 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 POLG2Q9UHN1 485 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 ENPP5Q9UJA9 477 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 UBXN8O00124 270 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 NCAM2O15394 837 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 NDUFS2O75306 463 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 UGT2B11O75310 529 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 PARNO95453 639 aaKnown RBP15.8■□□□□ 0.12
CKAP4-201ENST00000378026 C22orf31O95567 290 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 LBPP18428 481 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 TGFBR1P36897 503 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 MTHFRP42898 656 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 GP2P55259 537 aaKnown RBP15.8■□□□□ 0.12
CKAP4-201ENST00000378026 CDKN2DP55273 166 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 NOL9Q5SY16 702 aaKnown RBP15.8■□□□□ 0.12
CKAP4-201ENST00000378026 BLOC1S3Q6QNY0 202 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 DCBLD1Q8N8Z6 715 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 PABPC5Q96DU9 382 aaKnown RBP15.8■□□□□ 0.12
CKAP4-201ENST00000378026 PSD2Q9BQI7 771 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 HGH1Q9BTY7 390 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 ULBP1Q9BZM6 244 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 TKTL2Q9H0I9 626 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 SCHIP1Q9P0W5 487 aaPredicted RBP15.8■□□□□ 0.12
CKAP4-201ENST00000378026 ANKMY1Q9P2S6 941 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 TMA7Q9Y2S6 64 aaKnown RBP15.8■□□□□ 0.12
CKAP4-201ENST00000378026 SCN4AP35499 1836 aa15.8■□□□□ 0.12
CKAP4-201ENST00000378026 FAM47E-STBD1D6RA91 191 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 HBP1O60381 514 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 TSPAN1O60635 241 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 CNTN5O94779 1100 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 ALPLP05186 524 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 ALOX5P09917 674 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 PAMP19021 973 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 SERPINB1P30740 379 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 ATP4BP51164 291 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 MTPNP58546 118 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 CD47Q08722 323 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 UNC93AQ86WB7 457 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 CHDHQ8NE62 594 aaPredicted RBP15.79■□□□□ 0.12
CKAP4-201ENST00000378026 FBXO30Q8TB52 745 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 PPM1MQ96MI6 270 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 CAMKK2Q96RR4 588 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 MARCH7Q9H992 704 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 SCUBE2Q9NQ36 999 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 AAR2Q9Y312 384 aaKnown RBP15.79■□□□□ 0.12
CKAP4-201ENST00000378026 ASPDHA6ND91 283 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 CCDC154A6NI56 674 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 MTSS1O43312 755 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 TBC1D4O60343 1298 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 CAPN15O75808 1086 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 C1RP00736 705 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 FYNP06241 537 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 TXNP10599 105 aaKnown RBP15.79■□□□□ 0.12
CKAP4-201ENST00000378026 SNX17Q15036 470 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 ADPRMQ3LIE5 342 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 CELF3Q5SZQ8 465 aaKnown RBP15.79■□□□□ 0.12
CKAP4-201ENST00000378026 DNAJC14Q6Y2X3 702 aaPredicted RBP15.79■□□□□ 0.12
CKAP4-201ENST00000378026 KIAA0408Q6ZU52 694 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 RBM23Q86U06 439 aaKnown RBP15.79■□□□□ 0.12
CKAP4-201ENST00000378026 ISCA2Q86U28 154 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 WDR6Q9NNW5 1121 aaKnown RBP15.79■□□□□ 0.12
CKAP4-201ENST00000378026 SYCE1LA8MT33 242 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.79■□□□□ 0.12
CKAP4-201ENST00000378026 GNGT2O14610 69 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 USP17L7P0C7H9 530 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 MAP2K4P45985 399 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 IL1RL1Q01638 556 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 CATSPEREQ5SY80 951 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 ATAD3BQ5T9A4 648 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 PAGE2Q7Z2X7 111 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 ZDHHC13Q8IUH4 622 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 TTC30BQ8N4P2 665 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 FAM86B1Q8N7N1 296 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 NODALQ96S42 347 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 CTRCQ99895 268 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 ITM2CQ9NQX7 267 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 PDGFCQ9NRA1 345 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 FAM118AQ9NWS6 357 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 UTS2RQ9UKP6 389 aa15.79■□□□□ 0.12
CKAP4-201ENST00000378026 DEAF1O75398 565 aaPredicted RBP15.78■□□□□ 0.12
CKAP4-201ENST00000378026 STAU1O95793 577 aaKnown RBP15.78■□□□□ 0.12
CKAP4-201ENST00000378026 NCS1P62166 190 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 TNFAIP1Q13829 316 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 AASDHQ4L235 1098 aaPredicted RBP15.78■□□□□ 0.12
CKAP4-201ENST00000378026 FBXO47Q5MNV8 452 aa15.78■□□□□ 0.12
CKAP4-201ENST00000378026 RBM48Q5RL73 367 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms