RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CARD8Q9Y2G2 431 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 BLACEA4D250 179 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ITGB3P05106 788 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 UBE2J2Q8N2K1 259 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 RDH14Q9HBH5 336 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 KRT84Q9NSB2 600 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 TEX46H3BTG2 121 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 WNT10BO00744 389 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 SLC22A10Q63ZE4 541 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 IYDQ6PHW0 289 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PLEKHH3Q7Z736 793 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ZFPM2Q8WW38 1151 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ADAM7Q9H2U9 754 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 NUDT5Q9UKK9 219 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PAICSP22234 425 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PGM2L1Q6PCE3 622 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PGAP1Q75T13 922 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 KDM1BQ8NB78 822 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 P2RY11Q96G91 374 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 NUDT4Q9NZJ9 180 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 AASSQ9UDR5 926 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 KCNU1A8MYU2 1149 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 DDX39AO00148 427 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 SYNCRIPO60506 623 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 IFNA7P01567 189 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 MBL2P11226 248 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 MANEAQ5SRI9 462 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 GON7Q9BXV9 100 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 FAM120CQ9NX05 1096 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 OAZ2O95190 189 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 FCHO2Q0JRZ9 810 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 TMEM63BQ5T3F8 832 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 TTC7BQ86TV6 843 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 UPF1Q92900 1129 aaKnown RBP eCLIP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 AP2M1Q96CW1 435 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 L3HYPDHQ96EM0 354 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ACOT13Q9NPJ3 140 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF280DQ6N043 979 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PTRH1Q86Y79 214 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PHF10Q8WUB8 498 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 CDH4P55283 916 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 WDR4P57081 412 aaKnown RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 POU4F2Q12837 409 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 PRKCQQ04759 706 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 VAC14Q08AM6 782 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 FADDQ13158 208 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 CENPLQ8N0S6 344 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-201ENST00000377861 SPATA17Q96L03 361 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 SCML2Q9UQR0 700 aa4.92□□□□□ -1.62
PCDH9-201ENST00000377861 POLRMTO00411 1230 aaKnown RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 INSRRP14616 1297 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 NME3Q13232 169 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 LIPJQ5W064 366 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 BRAT1Q6PJG6 821 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 KIAA2013Q8IYS2 634 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SPARTQ8N0X7 666 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ABHD8Q96I13 439 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 DNMT3AQ9Y6K1 912 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ANKDD1AQ495B1 522 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 TMEM143Q96AN5 459 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 DPPA5A6NC42 116 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 KIAA0355O15063 1070 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PDE1CQ14123 709 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 KCNJ11Q14654 390 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 TAF1AQ15573 450 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PRAMEF8Q5VWM4 474 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PRAMEF7Q5VXH5 474 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CHST7Q9NS84 486 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 UPB1Q9UBR1 384 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SOCS5O75159 536 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SLC2A4P14672 509 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CPB1P15086 417 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 OR1E1P30953 314 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 OR8J1Q8NGP2 316 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CXorf40AQ8TE69 158 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF597Q96LX8 424 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 TMEM74Q96NL1 305 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 EGFL8Q99944 293 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SLC22A4Q9H015 551 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 WWP2O00308 870 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 MAGEA3P43357 314 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 AP2S1P53680 142 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 EARS2Q5JPH6 523 aaKnown RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ATG16L2Q8NAA4 619 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 MRPS31Q92665 395 aaKnown RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 NT5C3BQ969T7 300 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 GPATCH1Q9BRR8 931 aaKnown RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 C1orf232A0A0U1RR37 186 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PI15O43692 258 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 UGT1A1P22309 533 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 SDC2P34741 201 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PMF1Q6P1K2 205 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ZBTB33Q86T24 672 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 XYLT1Q86Y38 959 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 TMA16Q96EY4 203 aaKnown RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 PPEF2O14830 753 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ATMINO43313 823 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 LRPAP1P30533 357 aa4.91□□□□□ -1.62
PCDH9-201ENST00000377861 CAMK2GQ13555 558 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-201ENST00000377861 ARHGAP19Q14CB8 494 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms