RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 STX16O14662 325 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 EDF1O60869 148 aaKnown RBP18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 MMP8P22894 467 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 DENND5AQ6IQ26 1287 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 NDRG1Q92597 394 aaKnown RBP18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 BRINP2Q9C0B6 783 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 LRRC4CQ9HCJ2 640 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 AP4B1Q9Y6B7 739 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 CILPO75339 1184 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 S100GP29377 79 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 AQP1P29972 269 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 SLC24A5Q71RS6 500 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 WDR55Q9H6Y2 383 aaPredicted RBP18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 NECTIN3Q9NQS3 549 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 U3KQV3 271 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 PGRMC2O15173 223 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 SPAM1P38567 509 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 PTPN9P43378 593 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 ZNF132P52740 706 aa18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 CLK4Q9HAZ1 481 aaKnown RBP18.93■□□□□ 0.62
TBC1D4-201ENST00000377625 IPO13O94829 963 aaKnown RBP18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 STBD1O95210 358 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 ELNP15502 786 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 SELPP16109 830 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 TPSB2P20231 275 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 SLC5A3P53794 718 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 ELP6Q0PNE2 266 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 TPSAB1Q15661 275 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 CHST9Q7L1S5 443 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 IDSP22304 550 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 KCTD19Q17RG1 926 aaPredicted RBP18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 TATDN1Q6P1N9 297 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 TDRD1Q9BXT4 1180 aaKnown RBP18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 TP73O15350 636 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 AKT2P31751 481 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 WASP42768 502 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 AAGABQ6PD74 315 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 DAW1Q8N136 415 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 PNPT1Q8TCS8 783 aaKnown RBP18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 LRRIQ1Q96JM4 1722 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 COX4I2Q96KJ9 171 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 INPP4AQ96PE3 977 aaPredicted RBP18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 SEC14L3Q9UDX4 400 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 ZBTB11O95625 1053 aaPredicted RBP18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 TACR2P21452 398 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 CRHR1P34998 444 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 TGFBR2P37173 567 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 AHI1Q8N157 1196 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 TRPS1Q9UHF7 1281 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 IRAK3Q9Y616 596 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 FAM86C2PA6NEL3 165 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 RNASEH2AO75792 299 aaKnown RBP18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 NDST3O95803 873 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 VIPP01282 170 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 CACNG1Q06432 222 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 FSTL1Q12841 308 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 RFTN2Q52LD8 501 aaPredicted RBP18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 MTX3Q5HYI7 312 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 FOXR2Q6PJQ5 311 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 RTL4Q6ZR62 310 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 CPSF7Q8N684 471 aaKnown RBP18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 C5orf34Q96MH7 638 aa18.92■□□□□ 0.62
TBC1D4-201ENST00000377625 MAGEB3O15480 346 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 SERPINA1P01009 418 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 RHOQP17081 205 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 CTSKP43235 329 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 ACTR3P61158 418 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 RFWD3Q6PCD5 774 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 CRELD2Q6UXH1 353 aaPredicted RBP18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 TBC1D21Q8IYX1 336 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 NMUR1Q9HB89 426 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 MTRF1O75570 445 aaKnown RBP18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 PEX5LQ8IYB4 626 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 SLC34A3Q8N130 599 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 CAPSLQ8WWF8 208 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 SMG7Q92540 1137 aaKnown RBP18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 PTPRJQ12913 1337 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 GIMD1P0DJR0 217 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 POMZP3Q6PJE2 187 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 HPS6Q86YV9 775 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 SLC44A1Q8WWI5 657 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 IKZF4Q9H2S9 585 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 RSL24D1Q9UHA3 163 aaKnown RBP18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 PADI3Q9ULW8 664 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 PLLPQ9Y342 182 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 TRBV23OR9-2A0A075B6M9 112 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 PSIP1O75475 530 aaKnown RBP18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 TGDSO95455 350 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 EPHX1P07099 455 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 KIR3DL1P43629 444 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 POLR2JP52435 117 aaKnown RBP18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 ACLYP53396 1101 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 RBM44Q6ZP01 1051 aaKnown RBP18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 IRGMA1A4Y4 181 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 C22orf31O95567 290 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 NFATC1O95644 943 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 COL6A2P12110 1019 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 LRRC17Q8N6Y2 441 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 GSTCDQ8NEC7 633 aa18.91■□□□□ 0.62
TBC1D4-201ENST00000377625 XAGE5Q8WWM1 108 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms