RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 ARHGAP12Q8IWW6 846 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 LZTR1Q8N653 840 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 ITFG1Q8TB96 612 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 ZC3H15Q8WU90 426 aaKnown RBP11.5□□□□□ -0.57
SEC23B-204ENST00000377475 FCRL5Q96RD9 977 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 MIR1-1HGQ9H1L0 117 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 AMBNQ9NP70 447 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 CATSPERZQ9NTU4 200 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 GDAP2Q9NXN4 497 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 POLG2Q9UHN1 485 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 POLR3HQ9Y535 204 aaPredicted RBP11.5□□□□□ -0.57
SEC23B-204ENST00000377475 IRAK2O43187 625 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 BCL10O95999 233 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 RPS9P46781 194 aaKnown RBP11.5□□□□□ -0.57
SEC23B-204ENST00000377475 RAD23AP54725 363 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 OR4D2P58180 307 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 AP5B1Q2VPB7 878 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 GLT6D1Q7Z4J2 308 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 CILP2Q8IUL8 1156 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 SLC22A9Q8IVM8 553 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 CHERPQ8IWX8 916 aaKnown RBP11.5□□□□□ -0.57
SEC23B-204ENST00000377475 LGI2Q8N0V4 545 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 C2CD4AQ8NCU7 369 aaPredicted RBP11.5□□□□□ -0.57
SEC23B-204ENST00000377475 OR52B6Q8NGF0 335 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 PNPT1Q8TCS8 783 aaKnown RBP11.5□□□□□ -0.57
SEC23B-204ENST00000377475 GLMNQ92990 594 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 CCDC126Q96EE4 140 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 GSTO2Q9H4Y5 243 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 ZNF696Q9H7X3 374 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 POLE4Q9NR33 117 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 MYADML2A6NDP7 307 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 PSMD3O43242 534 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 CCNCP24863 283 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 CLCN5P51795 746 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 NUP107P57740 925 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 RPL38P63173 70 aaKnown RBP11.5□□□□□ -0.57
SEC23B-204ENST00000377475 RAB39AQ14964 217 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 NOL9Q5SY16 702 aaKnown RBP11.5□□□□□ -0.57
SEC23B-204ENST00000377475 PHACTR4Q8IZ21 702 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 OR10A6Q8NH74 314 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 ULK4Q96C45 1275 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 RERGLQ9H628 205 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 RASSF1Q9NS23 344 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 MAP10Q9P2G4 905 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 SLC8A2Q9UPR5 921 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 PHIPQ8WWQ0 1821 aa11.5□□□□□ -0.57
SEC23B-204ENST00000377475 AXIN1O15169 862 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 NPHS1O60500 1241 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 ABCB1P08183 1280 aaPredicted RBP11.49□□□□□ -0.57
SEC23B-204ENST00000377475 IMPDH1P20839 514 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 POLR2IP36954 125 aaKnown RBP11.49□□□□□ -0.57
SEC23B-204ENST00000377475 CHRNB3Q05901 458 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 VAC14Q08AM6 782 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 MEP1AQ16819 746 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 TRIM16LQ309B1 348 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 ZNF792Q3KQV3 632 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 EGFLAMQ63HQ2 1017 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 ABRAXAS1Q6UWZ7 409 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 SLC22A15Q8IZD6 547 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 CLDN19Q8N6F1 224 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 FAR2Q96K12 515 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 C9orf16Q9BUW7 83 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 ROGDIQ9GZN7 287 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 SLC38A7Q9NVC3 462 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 SUCOQ9UBS9 1254 aaKnown RBP11.49□□□□□ -0.57
SEC23B-204ENST00000377475 TRMT6Q9UJA5 497 aaKnown RBP11.49□□□□□ -0.57
SEC23B-204ENST00000377475 SNX5Q9Y5X3 404 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 ARVCFO00192 962 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 KCNQ1P51787 676 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 CLCN2P51788 898 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 DGKEP52429 567 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 RPS24P62847 133 aaKnown RBP11.49□□□□□ -0.57
SEC23B-204ENST00000377475 PPIL2Q13356 520 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 SEMA3AQ14563 771 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 ACAP2Q15057 778 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 TBPL2Q6SJ96 375 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 ERMP1Q7Z2K6 904 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 OR4L1Q8NH43 312 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 IGSF8Q969P0 613 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 LINGO1Q96FE5 620 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 OSBPL6Q9BZF3 934 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 HPS4Q9NQG7 708 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 IFT80Q9P2H3 777 aaPredicted RBP11.49□□□□□ -0.57
SEC23B-204ENST00000377475 DAPK2Q9UIK4 370 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 CDH9Q9ULB4 789 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 INVSQ9Y283 1065 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 PKP3Q9Y446 797 aa11.49□□□□□ -0.57
SEC23B-204ENST00000377475 STX7O15400 261 aaKnown RBP11.48□□□□□ -0.57
SEC23B-204ENST00000377475 SLC22A3O75751 556 aa11.48□□□□□ -0.57
SEC23B-204ENST00000377475 SLC6A2P23975 617 aa11.48□□□□□ -0.57
SEC23B-204ENST00000377475 PSMB9P28065 219 aa11.48□□□□□ -0.57
SEC23B-204ENST00000377475 EIF2B2P49770 351 aaKnown RBP11.48□□□□□ -0.57
SEC23B-204ENST00000377475 RAD51Q06609 339 aa11.48□□□□□ -0.57
SEC23B-204ENST00000377475 PTGR1Q14914 329 aa11.48□□□□□ -0.57
SEC23B-204ENST00000377475 FSCN1Q16658 493 aaKnown RBP11.48□□□□□ -0.57
SEC23B-204ENST00000377475 TIGD7Q6NT04 549 aaPredicted RBP11.48□□□□□ -0.57
SEC23B-204ENST00000377475 MAMDC4Q6UXC1 1216 aa11.48□□□□□ -0.57
SEC23B-204ENST00000377475 CPSF7Q8N684 471 aaKnown RBP11.48□□□□□ -0.57
SEC23B-204ENST00000377475 OR13J1Q8NGT2 312 aa11.48□□□□□ -0.57
SEC23B-204ENST00000377475 NTAN1Q96AB6 310 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms