RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 B4GALNT2Q8NHY0 566 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 EEF1AKMT1Q8WVE0 214 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 DPF3Q92784 378 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 SLC30A3Q99726 388 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 FAF1Q9UNN5 650 aaPredicted RBP12.86□□□□□ -0.35
USP11-204ENST00000377107 SCML2Q9UQR0 700 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 KPNA6O60684 536 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 PEX11BO96011 259 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 CYP11A1P05108 521 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 ATXN1LP0C7T5 689 aaKnown RBP12.86□□□□□ -0.35
USP11-204ENST00000377107 FASP25445 335 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 ZNF33AQ06730 810 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 LARP4Q71RC2 724 aaKnown RBP eCLIP12.86□□□□□ -0.358e-8■□□□□ 9.7
USP11-204ENST00000377107 CDC26Q8NHZ8 85 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 BRSK1Q8TDC3 778 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 FBXL20Q96IG2 436 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 TEX37Q96LM6 180 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 MRPS26Q9BYN8 205 aaKnown RBP12.86□□□□□ -0.35
USP11-204ENST00000377107 ZNF385DQ9H6B1 395 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 ZFP14Q9HCL3 533 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 TMEM248Q9NWD8 314 aa12.86□□□□□ -0.35
USP11-204ENST00000377107 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 CACNG3O60359 315 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 ZNF623O75123 536 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 VPS26AO75436 327 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 GMNNO75496 209 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 ALDH2P05091 517 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 FGF1P05230 155 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 PCSK6P29122 969 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 HSPA13P48723 471 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 DGKQP52824 942 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 ESRRGP62508 458 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 GNA12Q03113 381 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 ZNF177Q13360 481 aaPredicted RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 PSAPL1Q6NUJ1 521 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 RTN4RL1Q86UN2 441 aaPredicted RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 GPSM1Q86YR5 675 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 SLC15A3Q8IY34 581 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 PIANPQ8IYJ0 282 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 CLHC1Q8NHS4 586 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 MIPOL1Q8TD10 442 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 GLT1D1Q96MS3 346 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 PRICKLE1Q96MT3 831 aaPredicted RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 HAUS8Q9BT25 410 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 SYTL2Q9HCH5 934 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP11-204ENST00000377107 SUCOQ9UBS9 1254 aaKnown RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 IKZF3Q9UKT9 509 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 LOC285556D6RIA3 1793 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 CLOCKO15516 846 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 DENRO43583 198 aaKnown RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 RTN3O95197 1032 aaPredicted RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 PYGLP06737 847 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 POLD2P49005 469 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 MTPNP58546 118 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 IL10RBQ08334 325 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 AAK1Q2M2I8 961 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 ATXN7L2Q5T6C5 722 aaPredicted RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 RNF219Q5W0B1 726 aaPredicted RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 PTRHD1Q6GMV3 140 aaKnown RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 C17orf99Q6UX52 265 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 SLC24A5Q71RS6 500 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 MRPL10Q7Z7H8 261 aaKnown RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 CLDN19Q8N6F1 224 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 SLCO4A1Q96BD0 722 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 MAELQ96JY0 434 aaKnown RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 LATS2Q9NRM7 1088 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 ZNHIT2Q9UHR6 403 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 MYO7AQ13402 2215 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 GNGT2O14610 69 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 HTRA2O43464 458 aaPredicted RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 NDST3O95803 873 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 ZNF26P17031 533 aaPredicted RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 HLA-DPA1P20036 260 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 SLC7A1P30825 629 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 LIPEQ05469 1076 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 TRIP4Q15650 581 aaPredicted RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 LRRC49Q8IUZ0 686 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 OR52B6Q8NGF0 335 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 THUMPD3Q9BV44 507 aaKnown RBP12.85□□□□□ -0.35
USP11-204ENST00000377107 ADNPQ9H2P0 1102 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 TUBB1Q9H4B7 451 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 MAP10Q9P2G4 905 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 RNF11Q9Y3C5 154 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 SLC30A1Q9Y6M5 507 aa12.85□□□□□ -0.35
USP11-204ENST00000377107 MANSC4A6NHS7 340 aaPredicted RBP12.84□□□□□ -0.35
USP11-204ENST00000377107 EI24O14681 340 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 VILLO15195 856 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 GSTA4O15217 222 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 GKP32189 559 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 GDF5P43026 501 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 NR1H2P55055 460 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 HMBOX1Q6NT76 420 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 TMEM214Q6NUQ4 689 aaKnown RBP12.84□□□□□ -0.35
USP11-204ENST00000377107 SLC2A7Q6PXP3 512 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 FAM151BQ6UXP7 276 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 CLEC4FQ8N1N0 589 aa12.84□□□□□ -0.35
USP11-204ENST00000377107 OR10Q1Q8NGQ4 319 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms