RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ATP13A5Q4VNC0 1218 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 CNKSR3Q6P9H4 555 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 SPESP1Q6UW49 350 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 ISLR2Q6UXK2 745 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 TTC29Q8NA56 475 aaPredicted RBP13.57□□□□□ -0.24
GPC6-201ENST00000377047 SH3RF2Q8TEC5 729 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 SNRNP27Q8WVK2 155 aaKnown RBP13.57□□□□□ -0.24
GPC6-201ENST00000377047 PSMG2Q969U7 264 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 RHOBTB2Q9BYZ6 727 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 FZD9O00144 591 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 MATN3O15232 486 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 SLC22A3O75751 556 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 TIE1P35590 1138 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 TBATAQ96M53 351 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 STX11O75558 287 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 TNFAIP8O95379 198 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 L1CAMP32004 1257 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 DGCR6Q14129 220 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 NR1D2Q14995 579 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 C2orf27AQ580R0 203 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 MSANTD2Q6P1R3 559 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 ARHGAP36Q6ZRI8 547 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 PRR23BQ6ZRT6 265 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 RTL3Q8N8U3 475 aaKnown RBP13.56□□□□□ -0.24
GPC6-201ENST00000377047 FAM98AQ8NCA5 519 aaKnown RBP13.56□□□□□ -0.24
GPC6-201ENST00000377047 ADAMTS15Q8TE58 950 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 IPCEF1Q8WWN9 437 aaPredicted RBP13.56□□□□□ -0.24
GPC6-201ENST00000377047 HIC2Q96JB3 615 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 APOLD1Q96LR9 279 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 TSSK3Q96PN8 268 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 PNPOQ9NVS9 261 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 SORCS3Q9UPU3 1222 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 INSL6Q9Y581 213 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 GMPPBQ9Y5P6 360 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 CST1P01037 141 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 TMED10P49755 219 aaKnown RBP13.56□□□□□ -0.24
GPC6-201ENST00000377047 AP1S1P61966 158 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 FOXM1Q08050 763 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 TAF5Q15542 800 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 KLHL12Q53G59 568 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 UBXN11Q5T124 520 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 TEX47Q8TBZ9 253 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 SLC25A51Q9H1U9 297 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 ATXN2Q99700 1313 aaKnown RBP13.56□□□□□ -0.24
GPC6-201ENST00000377047 IGKV6D-41A0A0C4DH26 115 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 CD48P09326 243 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 TRAF3Q13114 568 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 RAPSNQ13702 412 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 XKR4Q5GH76 650 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 SERPINA9Q86WD7 417 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 ULK2Q8IYT8 1036 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 BPIFB6Q8NFQ5 453 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 SCAMP5Q8TAC9 235 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 FAM155BO75949 473 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 ITGAXP20702 1163 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 GDI1P31150 447 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 NRG1Q02297 640 aaPredicted RBP13.56□□□□□ -0.24
GPC6-201ENST00000377047 SLC20A2Q08357 652 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 USP4Q13107 963 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 TMEM220Q6QAJ8 160 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 RPTNQ6XPR3 784 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 ADCY4Q8NFM4 1077 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 GGA2Q9UJY4 613 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 C9IYK1 514 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 TRIM38O00635 465 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 MGRN1O60291 552 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 AP2A1O95782 977 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 CACNA2D1P54289 1103 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 GJA9P57773 515 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 MPP1Q00013 466 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 ARHGAP1Q07960 439 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 PDK4Q16654 411 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 BTN2A1Q7KYR7 527 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 CLVS1Q8IUQ0 354 aaPredicted RBP13.56□□□□□ -0.24
GPC6-201ENST00000377047 MCEMP1Q8IX19 187 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 ST13P5Q8NFI4 369 aaPredicted RBP13.56□□□□□ -0.24
GPC6-201ENST00000377047 PTCD2Q8WV60 388 aaKnown RBP13.56□□□□□ -0.24
GPC6-201ENST00000377047 TFAP2BQ92481 460 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 RCN3Q96D15 328 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 PTCD3Q96EY7 689 aaKnown RBP13.56□□□□□ -0.24
GPC6-201ENST00000377047 ST6GALNAC4Q9H4F1 302 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 CCDC177Q9NQR7 707 aaPredicted RBP13.56□□□□□ -0.24
GPC6-201ENST00000377047 FZD10Q9ULW2 581 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 GSTK1Q9Y2Q3 226 aa13.56□□□□□ -0.24
GPC6-201ENST00000377047 COL14A1Q05707 1796 aaKnown RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 GNSP15586 552 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 CDH5P33151 784 aaPredicted RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 CSKP41240 450 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 MASP1P48740 699 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 DGKEP52429 567 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 CERS6Q6ZMG9 384 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 TSTD1Q8NFU3 115 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 RP9Q8TA86 221 aaKnown RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 VANGL1Q8TAA9 524 aaPredicted RBP13.55□□□□□ -0.24
GPC6-201ENST00000377047 ZCCHC10Q8TBK6 192 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 HMGB4Q8WW32 186 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 SIRPGQ9P1W8 387 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 FBXW11Q9UKB1 542 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 IFT172Q9UG01 1749 aa13.55□□□□□ -0.24
GPC6-201ENST00000377047 DDX3YO15523 660 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms