RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 DMC1Q14565 340 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 PDCD2Q16342 344 aaPredicted RBP16.71■□□□□ 0.27
HLA-A-202ENST00000376806 ZNF678Q5SXM1 525 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 PDE12Q6L8Q7 609 aaKnown RBP16.71■□□□□ 0.27
HLA-A-202ENST00000376806 FAM151BQ6UXP7 276 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 ACAD11Q709F0 780 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 RPS27LQ71UM5 84 aaKnown RBP16.71■□□□□ 0.27
HLA-A-202ENST00000376806 FBXO27Q8NI29 283 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 GRIN3AQ8TCU5 1115 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 KIAA1191Q96A73 305 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 ECHDC3Q96DC8 303 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 OTUB2Q96DC9 234 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 PPP1R36Q96LQ0 422 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 LYSMD1Q96S90 227 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 SLC30A3Q99726 388 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 OSBPL1AQ9BXW6 950 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 P2RY12Q9H244 342 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 WDR55Q9H6Y2 383 aaPredicted RBP16.71■□□□□ 0.27
HLA-A-202ENST00000376806 EML4Q9HC35 981 aaKnown RBP16.71■□□□□ 0.27
HLA-A-202ENST00000376806 MARK1Q9P0L2 795 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 GALPQ9UBC7 116 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 DPP7Q9UHL4 492 aa16.71■□□□□ 0.27
HLA-A-202ENST00000376806 TRMT6Q9UJA5 497 aaKnown RBP16.71■□□□□ 0.27
HLA-A-202ENST00000376806 UBXN8O00124 270 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 KERAO60938 352 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 TPBGLP0DKB5 382 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 EPHA3P29320 983 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 HERVK_113P63132 956 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 ECT2LQ008S8 904 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 ACCSLQ4AC99 568 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 CARD16Q5EG05 197 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 CERS6Q6ZMG9 384 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 CUZD1Q86UP6 607 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 ADIPOR2Q86V24 386 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 NKAPQ8N5F7 415 aaKnown RBP16.7■□□□□ 0.26
HLA-A-202ENST00000376806 PTGR2Q8N8N7 351 aaPredicted RBP16.7■□□□□ 0.26
HLA-A-202ENST00000376806 SIDT2Q8NBJ9 832 aaKnown RBP16.7■□□□□ 0.26
HLA-A-202ENST00000376806 RBM15BQ8NDT2 890 aaKnown RBP16.7■□□□□ 0.26
HLA-A-202ENST00000376806 GIMAP7Q8NHV1 300 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 CD200R1Q8TD46 325 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 KCNJ9Q92806 393 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 MCUR1Q96AQ8 359 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 TRMOQ9BU70 441 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 CCDC28BQ9BUN5 200 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 ERVK-6Q9BXR3 956 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 ZDHHC6Q9H6R6 413 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 IKZF3Q9UKT9 509 aa16.7■□□□□ 0.26
HLA-A-202ENST00000376806 MRPS23Q9Y3D9 190 aaKnown RBP16.7■□□□□ 0.26
HLA-A-202ENST00000376806 NPIPB15A6NHN6 443 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-202ENST00000376806 MTHFD2P13995 350 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 ITGALP20701 1170 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 GPM6BQ13491 265 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 LSM12Q3MHD2 195 aaKnown RBP16.69■□□□□ 0.26
HLA-A-202ENST00000376806 UNC50Q53HI1 259 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 SNX20Q7Z614 316 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 ADGRD2Q7Z7M1 963 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 RBM23Q86U06 439 aaKnown RBP16.69■□□□□ 0.26
HLA-A-202ENST00000376806 TMPRSS6Q8IU80 811 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 TDHQ8IZJ6 230 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 PHTF2Q8N3S3 785 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 AFAP1L2Q8N4X5 818 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 FAR2Q96K12 515 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 PBX4Q9BYU1 374 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 CPEB1Q9BZB8 566 aaKnown RBP16.69■□□□□ 0.26
HLA-A-202ENST00000376806 SUV39H2Q9H5I1 410 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 APPL1Q9UKG1 709 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 PCDHB1Q9Y5F3 818 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 PIKFYVEQ9Y2I7 2098 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 NPEPPSL1A6NEC2 478 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 TRPC5OSA6NMA1 111 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 E5RI56 91 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 PRMT5O14744 637 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-202ENST00000376806 SLC9A3R1O14745 358 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-202ENST00000376806 DCXO43602 365 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 BPIP17213 487 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 CBX2Q14781 532 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-202ENST00000376806 DPY19L3Q6ZPD9 716 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 RAB44Q7Z6P3 723 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-202ENST00000376806 KIAA0907Q7Z7F0 614 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-202ENST00000376806 TSPAN33Q86UF1 283 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 SERPINA9Q86WD7 417 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 AHI1Q8N157 1196 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 STAG3L4Q8TBR4 150 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 SAMD11Q96NU1 681 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 MMADHCQ9H3L0 296 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-202ENST00000376806 TNFRSF12AQ9NP84 129 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 SLCO3A1Q9UIG8 710 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 RNF112Q9ULX5 631 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 PPIL1Q9Y3C6 166 aa16.69■□□□□ 0.26
HLA-A-202ENST00000376806 ANKRD12Q6UB98 2062 aa16.68■□□□□ 0.26
HLA-A-202ENST00000376806 KIF26AQ9ULI4 1882 aaPredicted RBP16.68■□□□□ 0.26
HLA-A-202ENST00000376806 TRBV5-4A0A0C4DH59 114 aa16.68■□□□□ 0.26
HLA-A-202ENST00000376806 MEI4A8MW99 385 aa16.68■□□□□ 0.26
HLA-A-202ENST00000376806 SUPT3HB4E1H0 165 aa16.68■□□□□ 0.26
HLA-A-202ENST00000376806 SDHDO14521 159 aa16.68■□□□□ 0.26
HLA-A-202ENST00000376806 SUPT3HO75486 399 aa16.68■□□□□ 0.26
HLA-A-202ENST00000376806 SUPT7LO94864 414 aa16.68■□□□□ 0.26
HLA-A-202ENST00000376806 POP4O95707 220 aaKnown RBP16.68■□□□□ 0.26
HLA-A-202ENST00000376806 TSPAN12O95859 305 aa16.68■□□□□ 0.26
HLA-A-202ENST00000376806 RPS3P23396 243 aaKnown RBP eCLIP16.68■□□□□ 0.265e-9■■■□□ 17.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms