RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 TRIM55Q9BYV6 548 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 CCDC68Q9H2F9 335 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 SLCO1B3Q9NPD5 702 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 B4GALT6Q9UBX8 382 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 USH1CQ9Y6N9 552 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 C16orf96A6NNT2 1141 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 PRMT5O14744 637 aaPredicted RBP11.05□□□□□ -0.64
PDPN-202ENST00000376057 VPS26AO75436 327 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 PRAMEF1O95521 474 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 APODP05090 189 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 CD1DP15813 335 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 ATP5F1P24539 256 aaPredicted RBP11.05□□□□□ -0.64
PDPN-202ENST00000376057 MMP12P39900 470 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 ZRANB3Q5FWF4 1079 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 CTSL3PQ5NE16 218 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 CES4AQ5XG92 561 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 NXPE1Q8N323 547 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 SORCS1Q8WY21 1168 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 PPP1R16AQ96I34 528 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 VPS35Q96QK1 796 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 FAM129BQ96TA1 746 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 NDNQ99608 321 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 APOL5Q9BWW9 433 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 TTYH1Q9H313 450 aaPredicted RBP11.05□□□□□ -0.64
PDPN-202ENST00000376057 FBRSQ9HAH7 460 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 ZNF358Q9NW07 568 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 KCTD5Q9NXV2 234 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 CLDND1Q9NY35 253 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 KCNK4Q9NYG8 393 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 CD207Q9UJ71 328 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 GNPTGQ9UJJ9 305 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 CRYL1Q9Y2S2 319 aa11.05□□□□□ -0.64
PDPN-202ENST00000376057 WDR91A4D1P6 747 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 KAT7O95251 611 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 CCDC166P0CW27 439 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 ABCE1P61221 599 aaKnown RBP11.04□□□□□ -0.64
PDPN-202ENST00000376057 PPARDQ03181 441 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 ELP6Q0PNE2 266 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 RALGDSQ12967 914 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 SMAD1Q15797 465 aaKnown RBP11.04□□□□□ -0.64
PDPN-202ENST00000376057 TMEM52BQ4KMG9 183 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 FNDC3BQ53EP0 1204 aaKnown RBP11.04□□□□□ -0.64
PDPN-202ENST00000376057 ERAP2Q6P179 960 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 FOXR1Q6PIV2 292 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 TECPR1Q7Z6L1 1165 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 ISCA2Q86U28 154 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 LDB1Q86U70 411 aaPredicted RBP11.04□□□□□ -0.64
PDPN-202ENST00000376057 CCDC63Q8NA47 563 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 GPR26Q8NDV2 337 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 MSANTD3Q96H12 275 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 MECRQ9BV79 373 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 DRC3Q9H069 523 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 BPIFA1Q9NP55 256 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 ZDHHC3Q9NYG2 299 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 DHRS7Q9Y394 339 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 CCT8L1PA6NM43 557 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 GLULP15104 373 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 GDI1P31150 447 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 SLC1A6P48664 564 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 FAM91A1Q658Y4 838 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 TSPAN33Q86UF1 283 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 SERPINA9Q86WD7 417 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 CRLF3Q8IUI8 442 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 TRAM1L1Q8N609 369 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 CCT6BQ92526 530 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 DNASE1L2Q92874 299 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 KIAA1191Q96A73 305 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 L3HYPDHQ96EM0 354 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 KXD1Q9BQD3 176 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 ASB8Q9H765 288 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 PCDH12Q9NPG4 1184 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 CDH22Q9UJ99 828 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 HCN2Q9UL51 889 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 KLK8O60259 260 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 DNAJC6O75061 913 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 F7P08709 466 aaPredicted RBP11.04□□□□□ -0.64
PDPN-202ENST00000376057 NEFHP12036 1026 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 NSG1P42857 185 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 CDKN1CP49918 316 aaPredicted RBP11.04□□□□□ -0.64
PDPN-202ENST00000376057 CLCN7P51798 805 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 HNRNPH2P55795 449 aaKnown RBP11.04□□□□□ -0.64
PDPN-202ENST00000376057 PDAP1Q13442 181 aaKnown RBP11.04□□□□□ -0.64
PDPN-202ENST00000376057 ARHGEF7Q14155 803 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 PTPRRQ15256 657 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 FAM47EQ6ZV65 393 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 PBXIP1Q96AQ6 731 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 FAM131CQ96AQ9 280 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 CNDP1Q96KN2 507 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 ZSCAN5AQ9BUG6 496 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 KCNK13Q9HB14 408 aa11.04□□□□□ -0.64
PDPN-202ENST00000376057 BPTFQ12830 3046 aa11.03□□□□□ -0.64
PDPN-202ENST00000376057 AREL1O15033 823 aa11.03□□□□□ -0.64
PDPN-202ENST00000376057 AP1G1O43747 822 aa11.03□□□□□ -0.64
PDPN-202ENST00000376057 DCTN3O75935 186 aa11.03□□□□□ -0.64
PDPN-202ENST00000376057 RHOBTB1O94844 696 aa11.03□□□□□ -0.64
PDPN-202ENST00000376057 AP2A2O94973 939 aa11.03□□□□□ -0.64
PDPN-202ENST00000376057 CBSLP0DN79 551 aa11.03□□□□□ -0.64
PDPN-202ENST00000376057 FMO4P31512 558 aa11.03□□□□□ -0.64
PDPN-202ENST00000376057 CBSP35520 551 aa11.03□□□□□ -0.64
PDPN-202ENST00000376057 MESP2Q0VG99 397 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms